Gene
RNA
| Item | Value |
|---|---|
| gene id | G621695 |
| gene name | LOC106582949 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 52491168 ~ 52493240 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106582949 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU707108 | True | 1064 | TUCP | 0.38 | 4 | 52491168 | 52493240 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-236d3.4 | LOC106583019 | coding | upstream | 1620 | 52445119 ~ 52489548 (+) |
| LOC110527974 | LOC106583021 | coding | upstream | 1058103 | 51429630 ~ 51433065 (+) |
| LOC110528964 | LOC106565849 | coding | upstream | 1072819 | 51252123 ~ 51418349 (+) |
| thoc7 | thoc7 | coding | upstream | 1333105 | 51152050 ~ 51158063 (+) |
| psd6 | psd6 | coding | upstream | 1393720 | 51093272 ~ 51097448 (+) |
| LOC110527978 | LOC106565857 | coding | downstream | 18030 | 52511270 ~ 52548815 (+) |
| LOC110527979 | LOC106583014 | coding | downstream | 166394 | 52659634 ~ 52669736 (+) |
| LOC110527981 | glt8d1 | coding | downstream | 188475 | 52681715 ~ 52691283 (+) |
| LOC118965296 | NA | coding | downstream | 215372 | 52708612 ~ 52713563 (+) |
| LOC110527982 | LOC106565863 | coding | downstream | 243361 | 52736601 ~ 52783292 (+) |
| G621720 | NA | non-coding | upstream | 472 | 52490493 ~ 52490696 (+) |
| G621583 | NA | non-coding | upstream | 135096 | 52351762 ~ 52356072 (+) |
| G621562 | NA | non-coding | upstream | 164383 | 52326567 ~ 52326785 (+) |
| G621561 | NA | non-coding | upstream | 165087 | 52325828 ~ 52326081 (+) |
| G621489 | NA | non-coding | upstream | 210543 | 52280416 ~ 52280625 (+) |
| G621724 | NA | non-coding | downstream | 7583 | 52500823 ~ 52501078 (+) |
| G621746 | NA | non-coding | downstream | 56659 | 52549899 ~ 52550128 (+) |
| G621755 | NA | non-coding | downstream | 73432 | 52566672 ~ 52566892 (+) |
| G621756 | NA | non-coding | downstream | 73916 | 52567156 ~ 52567511 (+) |
| G621812 | NA | non-coding | downstream | 165748 | 52658988 ~ 52659405 (+) |
| G621650 | NA | other | upstream | 99535 | 52391348 ~ 52391633 (+) |
| LOC110527970 | LOC106583026 | other | upstream | 1417161 | 50960494 ~ 51079129 (+) |
| G618712 | LOC106583033 | other | upstream | 2186936 | 50303430 ~ 50304232 (+) |
| tafa4b | LOC106583040 | other | upstream | 2871000 | 49571790 ~ 49620194 (+) |
| G617133 | NA | other | upstream | 3663941 | 48826827 ~ 48827227 (+) |
| G623180 | NA | other | downstream | 1260666 | 53753906 ~ 53754119 (+) |
| G624628 | NA | other | downstream | 2330397 | 54823637 ~ 54824199 (+) |
| G624962 | LOC106582975 | other | downstream | 2554056 | 55047296 ~ 55052688 (+) |
| LOC110528007 | LOC106582974 | other | downstream | 2577392 | 55053185 ~ 55074095 (+) |
| LOC110527126 | LOC106582962 | other | downstream | 2714421 | 55207615 ~ 55208708 (+) |
