G621724


Basic Information

Item Value
gene id G621724
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 52500823 ~ 52501078 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU707137
gcacaacacatcacagggggcaaactacctgccctccaggacacctacagcacccaatgtcacaggaaggccaaaaagatcatcaaggacaacaaccacccgagccactgcctgttcaccctgttgaCATTCAGAAGGCgcagtcagtacaggtgcatcaaagctgggaccgagagactgaaaaacagcttctttctcaaggccatcagactgttaaacagccatcaccagcacagagaggctgctgcctcgGTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU707137 True 256 lncRNA 0.53 1 52500823 52501078

Neighbor

gene id symbol gene type direction distance location
si:ch211-236d3.4 LOC106583019 coding upstream 11275 52445119 ~ 52489548 (+)
LOC110527974 LOC106583021 coding upstream 1067758 51429630 ~ 51433065 (+)
LOC110528964 LOC106565849 coding upstream 1082474 51252123 ~ 51418349 (+)
thoc7 thoc7 coding upstream 1342760 51152050 ~ 51158063 (+)
psd6 psd6 coding upstream 1403375 51093272 ~ 51097448 (+)
LOC110527978 LOC106565857 coding downstream 10192 52511270 ~ 52548815 (+)
LOC110527979 LOC106583014 coding downstream 158556 52659634 ~ 52669736 (+)
LOC110527981 glt8d1 coding downstream 180637 52681715 ~ 52691283 (+)
LOC118965296 NA coding downstream 207534 52708612 ~ 52713563 (+)
LOC110527982 LOC106565863 coding downstream 235523 52736601 ~ 52783292 (+)
G621720 NA non-coding upstream 10127 52490493 ~ 52490696 (+)
G621583 NA non-coding upstream 144751 52351762 ~ 52356072 (+)
G621562 NA non-coding upstream 174038 52326567 ~ 52326785 (+)
G621561 NA non-coding upstream 174742 52325828 ~ 52326081 (+)
G621489 NA non-coding upstream 220198 52280416 ~ 52280625 (+)
G621746 NA non-coding downstream 48821 52549899 ~ 52550128 (+)
G621755 NA non-coding downstream 65594 52566672 ~ 52566892 (+)
G621756 NA non-coding downstream 66078 52567156 ~ 52567511 (+)
G621812 NA non-coding downstream 157910 52658988 ~ 52659405 (+)
G621816 NA non-coding downstream 166053 52667131 ~ 52667553 (+)
G621695 LOC106582949 other upstream 7583 52491168 ~ 52493240 (+)
G621650 NA other upstream 109190 52391348 ~ 52391633 (+)
LOC110527970 LOC106583026 other upstream 1426816 50960494 ~ 51079129 (+)
G618712 LOC106583033 other upstream 2196591 50303430 ~ 50304232 (+)
tafa4b LOC106583040 other upstream 2880655 49571790 ~ 49620194 (+)
G623180 NA other downstream 1252828 53753906 ~ 53754119 (+)
G624628 NA other downstream 2322559 54823637 ~ 54824199 (+)
G624962 LOC106582975 other downstream 2546218 55047296 ~ 55052688 (+)
LOC110528007 LOC106582974 other downstream 2569554 55053185 ~ 55074095 (+)
LOC110527126 LOC106582962 other downstream 2706583 55207615 ~ 55208708 (+)

Expression


Co-expression Network