Gene
RNA
| Item | Value |
|---|---|
| gene id | G621988 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 52557243 ~ 52557556 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU707436 | True | 314 | lncRNA | 0.40 | 1 | 52557243 | 52557556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965403 | NA | coding | downstream | 103350 | 52453839 ~ 52453893 (-) |
| ptprga | LOC106583020 | coding | downstream | 830765 | 51449031 ~ 51726478 (-) |
| LOC110527973 | synpr | coding | downstream | 1350034 | 51179203 ~ 51207209 (-) |
| LOC110527971 | LOC106583024 | coding | downstream | 1405223 | 51097457 ~ 51152020 (-) |
| LOC118965295 | NA | coding | downstream | 1466079 | 51087289 ~ 51091164 (-) |
| camk1b | LOC106583015 | coding | upstream | 26233 | 52583789 ~ 52658755 (-) |
| spcs1 | spcs1 | coding | upstream | 111896 | 52669452 ~ 52672489 (-) |
| gnl3 | LOC106583012 | coding | upstream | 133785 | 52691341 ~ 52696843 (-) |
| LOC118965419 | NA | coding | upstream | 134556 | 52692112 ~ 52692187 (-) |
| LOC118965421 | NA | coding | upstream | 134889 | 52692445 ~ 52692518 (-) |
| G621955 | NA | non-coding | downstream | 50272 | 52506727 ~ 52506971 (-) |
| G621946 | NA | non-coding | downstream | 58776 | 52498163 ~ 52498467 (-) |
| G621918 | LOC106583019 | non-coding | downstream | 67744 | 52481627 ~ 52489499 (-) |
| G621940 | NA | non-coding | downstream | 79713 | 52472624 ~ 52477530 (-) |
| G621896 | NA | non-coding | downstream | 92818 | 52411290 ~ 52464425 (-) |
| G621993 | NA | non-coding | upstream | 4993 | 52562549 ~ 52562760 (-) |
| G622061 | NA | non-coding | upstream | 115467 | 52673023 ~ 52674718 (-) |
| G622088 | NA | non-coding | upstream | 163185 | 52720741 ~ 52720961 (-) |
| G622357 | NA | non-coding | upstream | 291337 | 52848893 ~ 52857351 (-) |
| G619733 | NA | other | downstream | 1598703 | 50956271 ~ 50958540 (-) |
| LOC110527964 | LOC106583033 | other | downstream | 2251087 | 50300364 ~ 50306278 (-) |
| LOC110527961 | LOC106565835 | other | downstream | 2620962 | 49660022 ~ 49936575 (-) |
| mustn1b | mstn1 | other | downstream | 3259995 | 49295040 ~ 49297305 (-) |
| G617632 | NA | other | downstream | 3361273 | 49195604 ~ 49195970 (-) |
| G622985 | NA | other | upstream | 747980 | 53305536 ~ 53322831 (-) |
| G625426 | NA | other | upstream | 2514923 | 55072479 ~ 55075396 (-) |
| G625472 | LOC106582968 | other | upstream | 2606936 | 55164492 ~ 55188756 (-) |
| LOC110528020 | LOC106582955 | other | upstream | 2875900 | 55420466 ~ 55566988 (-) |
| G627254 | NA | other | upstream | 4133767 | 56691323 ~ 56696091 (-) |
