XLOC_025431 (CR936968.2)



Basic Information


Item Value
gene id XLOC_025431
gene name CR936968.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 30354768 ~ 30355587 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00050165
gtactggatttatttatgtatataaaacagGAGCAACTAAAACCAGTGAGACCTGTGTGAGAAACGATCTGAAATAAACCGTGTGCGTGCCTAAGAAATCCTCaattcataaacaaatgattcatGCGAAGATCTTAACAATGAATCATTTGCTCTAGTTCCCAGATCCACTCTGAATTGTTTGCTCTGAATGATTCAGATTGATTCAGCGCTTTAATTCAACTCGCAGACTCAATGATCCATTTAACAGTGGAAAACAGCCCACCAGAGGAACATCATCAGTGAATGGCTTGAATTTCAGACTGCTCATCACACACAAATACTGTGGGACTTCAAATACAGTGCATGAGTCAAACGGACCACTTTTATGATGCTCCTGCAGCCTAAAATATTTCAACTTTTGGGTTCCACAATAGAAAGAAACATTTCTAGTTttttgggtgagtaaatgattacaggcTTTACATTTTCTGTGTAAATGATccctttaaatcagtgtttctcaaatctgttcctgaagACTGAATGGAAAGTATCTTCTCTTCATTTCACATCATTTCTCTGAAAGCTGGTGACTCAGAAGGAAAAGGTCTGATGCGTTTTCCGCATGTCAGAAGATATAGATGTAGGGAAGGAGGAAGA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096420

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00050165 True 642 lncRNA 0.38 2 30354768 30355587

Neighbor


gene id symbol gene type direction distance location
XLOC_025430 mybpc2a coding upstream 1513 30257582 ~ 30353255 (+)
XLOC_025428 akt1s1 coding upstream 154211 30190419 ~ 30200557 (+)
XLOC_025427 kcna7 coding upstream 370900 29980603 ~ 29983868 (+)
XLOC_025426 NA coding upstream 387698 29966783 ~ 29967070 (+)
XLOC_025425 ifi35 coding upstream 405813 29941777 ~ 29948955 (+)
XLOC_025432 NA coding downstream 142134 30497721 ~ 30506149 (+)
XLOC_025433 si:dkey-13n23.3 coding downstream 145381 30500968 ~ 30504419 (+)
XLOC_025434 NA coding downstream 287575 30643162 ~ 30655558 (+)
XLOC_025435 NA coding downstream 338587 30694174 ~ 30695807 (+)
XLOC_025436 NA coding downstream 512831 30868418 ~ 30873160 (+)
XLOC_025429 BX649540.1 misc upstream 105732 30248739 ~ 30249036 (+)
XLOC_025424 BX901883.3 non-coding upstream 424881 29929582 ~ 29929887 (+)
XLOC_025423 NA non-coding upstream 439411 29914444 ~ 29915357 (+)
XLOC_025420 NA non-coding upstream 644546 29687549 ~ 29710222 (+)
XLOC_025419 CT573429.1 non-coding upstream 683115 29664357 ~ 29671653 (+)
XLOC_025437 NA non-coding downstream 552305 30907892 ~ 30908126 (+)

Expression



Co-expression Network