G621822


Basic Information

Item Value
gene id G621822
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 52676253 ~ 52676622 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU707245
ATATATTCTGTCTCTACTGGTGCTGTCACTGATAAAACTAGCTTGAtgtctgtcacggtcgtcctcctcttcatctgaagaggagaggcgagatggatcggaagaccaaaatgcggcgtggtaagtgtccatggtaaatctttaatcaagaaagactgaacactatacaaacgagtaacaaaaacaataaaccaaattcgaccgtgaagctacaaaatgagacctgtgctgaaacaagccatcaacatagacaatcacccacaaacaaacagtgcaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaaacatagaaatgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU707245 True 370 lncRNA 0.42 1 52676253 52676622

Neighbor

gene id symbol gene type direction distance location
LOC110527979 LOC106583014 coding upstream 6517 52659634 ~ 52669736 (+)
LOC110527978 LOC106565857 coding upstream 127438 52511270 ~ 52548815 (+)
si:ch211-236d3.4 LOC106583019 coding upstream 186705 52445119 ~ 52489548 (+)
LOC110527974 LOC106583021 coding upstream 1243188 51429630 ~ 51433065 (+)
LOC110528964 LOC106565849 coding upstream 1257904 51252123 ~ 51418349 (+)
LOC110527981 glt8d1 coding downstream 5093 52681715 ~ 52691283 (+)
LOC118965296 NA coding downstream 31990 52708612 ~ 52713563 (+)
LOC110527982 LOC106565863 coding downstream 59979 52736601 ~ 52783292 (+)
glut1a glut1a coding downstream 205878 52882500 ~ 52903136 (+)
LOC110527984 LOC106583006 coding downstream 246255 52922877 ~ 53091054 (+)
G621821 NA non-coding upstream 210 52675738 ~ 52676043 (+)
G621816 NA non-coding upstream 8700 52667131 ~ 52667553 (+)
G621812 NA non-coding upstream 16848 52658988 ~ 52659405 (+)
G621756 NA non-coding upstream 108742 52567156 ~ 52567511 (+)
G621755 NA non-coding upstream 109361 52566672 ~ 52566892 (+)
G621850 NA non-coding downstream 51905 52728527 ~ 52728802 (+)
G622182 NA non-coding downstream 231987 52908609 ~ 52908814 (+)
G622216 NA non-coding downstream 282356 52958978 ~ 52976643 (+)
G622304 NA non-coding downstream 427928 53104550 ~ 53116589 (+)
G621695 LOC106582949 other upstream 183013 52491168 ~ 52493240 (+)
G621650 NA other upstream 284620 52391348 ~ 52391633 (+)
LOC110527970 LOC106583026 other upstream 1602246 50960494 ~ 51079129 (+)
G618712 LOC106583033 other upstream 2372021 50303430 ~ 50304232 (+)
tafa4b LOC106583040 other upstream 3056085 49571790 ~ 49620194 (+)
G623180 NA other downstream 1077284 53753906 ~ 53754119 (+)
G624628 NA other downstream 2147015 54823637 ~ 54824199 (+)
G624962 LOC106582975 other downstream 2370674 55047296 ~ 55052688 (+)
LOC110528007 LOC106582974 other downstream 2394010 55053185 ~ 55074095 (+)
LOC110527126 LOC106582962 other downstream 2531039 55207615 ~ 55208708 (+)

Expression


Co-expression Network