G622512



Basic Information


Item Value
gene id G622512
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 53123265 ~ 53123699 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU707994
AGATAGCTAGGTTGATTACTAAAATGCTAACATCTATATTTTAATACCATAACCCACAGACTTGACCATAGTAATGGTAAAATAGACTGTGCAAATGGTCTAtcgacatacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatatagacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccacctcttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaatttttttcccattcctccttgc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU707994 True 435 lncRNA 0.37 1 53123265 53123699

Neighbor


gene id symbol gene type direction distance location
pad LOC106583007 coding downstream 17401 53090437 ~ 53105864 (-)
LOC110527983 LOC106583010 coding downstream 281496 52785667 ~ 52841769 (-)
LOC118965418 NA coding downstream 428789 52694402 ~ 52694476 (-)
LOC118965422 NA coding downstream 429246 52693944 ~ 52694019 (-)
LOC118965420 NA coding downstream 430166 52693025 ~ 52693099 (-)
LOC118965299 NA coding upstream 245935 53368443 ~ 53373429 (-)
LOC101268938 cd34 coding upstream 256802 53380501 ~ 53400793 (-)
LOC110527988 plxna2 coding upstream 306248 53429947 ~ 53486228 (-)
LOC118965356 NA coding upstream 403149 53526848 ~ 53530100 (-)
kif17 kif17 coding upstream 466139 53589838 ~ 53602153 (-)
G622347 NA non-coding downstream 220133 52898545 ~ 52903132 (-)
G622374 NA non-coding downstream 241654 52878752 ~ 52881611 (-)
G622366 NA non-coding downstream 250534 52869067 ~ 52872731 (-)
G622364 NA non-coding downstream 261809 52861239 ~ 52861456 (-)
G622362 NA non-coding downstream 263104 52859951 ~ 52860161 (-)
G622514 NA non-coding upstream 1460 53125159 ~ 53125391 (-)
G622517 NA non-coding upstream 11140 53134839 ~ 53136930 (-)
G622528 NA non-coding upstream 16373 53140072 ~ 53140363 (-)
G622534 NA non-coding upstream 21717 53145416 ~ 53145784 (-)
G622874 LOC105006631 non-coding upstream 26778 53150477 ~ 53243842 (-)
G619733 NA other downstream 2164725 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 2817109 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 3186984 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 3826017 49295040 ~ 49297305 (-)
G617632 NA other downstream 3927295 49195604 ~ 49195970 (-)
G622985 NA other upstream 181837 53305536 ~ 53322831 (-)
G625426 NA other upstream 1948780 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 2040793 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 2309757 55420466 ~ 55566988 (-)
G627254 NA other upstream 3567624 56691323 ~ 56696091 (-)

Expression



Co-expression Network