G622528



Basic Information


Item Value
gene id G622528
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 53140072 ~ 53140363 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU708010
CAAatattttctctggtaggcacaacctacctggcacccctataaacaATAAcctcaagtcggaagtttacatacaccttagacaaatacattttaaactcagtttttcacaattcctgacatttagtcctagtaaaaattccctgtcttacgtcagttaggatcaccactttattttaagaatgtgaaatgtcagaatagtagagaatgatttatttcagctttgatttctttcatcacattcccagtgggtcagaagcttacatacactcaattagtattcggtagcatt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU708010 True 292 lncRNA 0.35 1 53140072 53140363

Neighbor


gene id symbol gene type direction distance location
pad LOC106583007 coding downstream 34208 53090437 ~ 53105864 (-)
LOC110527983 LOC106583010 coding downstream 298303 52785667 ~ 52841769 (-)
LOC118965418 NA coding downstream 445596 52694402 ~ 52694476 (-)
LOC118965422 NA coding downstream 446053 52693944 ~ 52694019 (-)
LOC118965420 NA coding downstream 446973 52693025 ~ 52693099 (-)
LOC118965299 NA coding upstream 229271 53368443 ~ 53373429 (-)
LOC101268938 cd34 coding upstream 240138 53380501 ~ 53400793 (-)
LOC110527988 plxna2 coding upstream 289584 53429947 ~ 53486228 (-)
LOC118965356 NA coding upstream 386485 53526848 ~ 53530100 (-)
kif17 kif17 coding upstream 449475 53589838 ~ 53602153 (-)
G622517 NA non-coding downstream 3142 53134839 ~ 53136930 (-)
G622514 NA non-coding downstream 14681 53125159 ~ 53125391 (-)
G622512 NA non-coding downstream 16373 53123265 ~ 53123699 (-)
G622347 NA non-coding downstream 236940 52898545 ~ 52903132 (-)
G622374 NA non-coding downstream 258461 52878752 ~ 52881611 (-)
G622534 NA non-coding upstream 5053 53145416 ~ 53145784 (-)
G622874 LOC105006631 non-coding upstream 10114 53150477 ~ 53243842 (-)
G622987 NA non-coding upstream 163481 53303844 ~ 53325990 (-)
G622991 NA non-coding upstream 177499 53317862 ~ 53319706 (-)
G619733 NA other downstream 2181532 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 2833916 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 3203791 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 3842824 49295040 ~ 49297305 (-)
G617632 NA other downstream 3944102 49195604 ~ 49195970 (-)
G622985 NA other upstream 165173 53305536 ~ 53322831 (-)
G625426 NA other upstream 1932116 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 2024129 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 2293093 55420466 ~ 55566988 (-)
G627254 NA other upstream 3550960 56691323 ~ 56696091 (-)

Expression



Co-expression Network