G623013



Basic Information


Item Value
gene id G623013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 53406030 ~ 53411743 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU708636
tttcagttgtaacaaaaaggcagtttattgagtcaaaagatatcttgtcctgcagTTTAACGTGCACGGACCTGATTCATATAGCTCAAAAGGAGTTAGCTGAAAAAGGGGCTTAGACAAAGGTTACAGCAGTTTTtatacatggaataatgtaggtAGAGTCTTGTCGTGTCGCCTTCTGAATGGTCCCGAAGGGTTGGAGGCGGAcctgctctagccagagcaggagccccattggtgcacagcagagtcTTCTGCTCTgggcacc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU708636 True 268 lncRNA 0.47 2 53406030 53411743

Neighbor


gene id symbol gene type direction distance location
LOC101268938 cd34 coding downstream 5237 53380501 ~ 53400793 (-)
LOC118965299 NA coding downstream 32601 53368443 ~ 53373429 (-)
pad LOC106583007 coding downstream 300166 53090437 ~ 53105864 (-)
LOC110527983 LOC106583010 coding downstream 564261 52785667 ~ 52841769 (-)
LOC118965418 NA coding downstream 711554 52694402 ~ 52694476 (-)
LOC110527988 plxna2 coding upstream 18204 53429947 ~ 53486228 (-)
LOC118965356 NA coding upstream 115105 53526848 ~ 53530100 (-)
kif17 kif17 coding upstream 178095 53589838 ~ 53602153 (-)
LOC110527994 LOC106582994 coding upstream 201824 53613567 ~ 53623906 (-)
LOC110527991 LOC106582993 coding upstream 212521 53624264 ~ 53636278 (-)
G622987 NA non-coding downstream 80040 53303844 ~ 53325990 (-)
G622991 NA non-coding downstream 86324 53317862 ~ 53319706 (-)
G622874 LOC105006631 non-coding downstream 162188 53150477 ~ 53243842 (-)
G622534 NA non-coding downstream 260246 53145416 ~ 53145784 (-)
G623018 LOC106581772 non-coding upstream 1187 53412930 ~ 53413188 (-)
G623173 NA non-coding upstream 323305 53735048 ~ 53737808 (-)
G623176 NA non-coding upstream 329611 53741354 ~ 53748563 (-)
G623177 NA non-coding upstream 339166 53750909 ~ 53751186 (-)
G622985 NA other downstream 83199 53305536 ~ 53322831 (-)
G619733 NA other downstream 2447490 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 3099874 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 3469749 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 4108782 49295040 ~ 49297305 (-)
G625426 NA other upstream 1660736 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 1752749 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 2021713 55420466 ~ 55566988 (-)
G627254 NA other upstream 3279580 56691323 ~ 56696091 (-)
G627314 NA other upstream 3422842 56834350 ~ 56835092 (-)

Expression



Co-expression Network