Gene
RNA
| Item | Value |
|---|---|
| gene id | G622799 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 53624441 ~ 53625752 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU708386 | True | 1291 | lncRNA | 0.43 | 2 | 53624441 | 53625752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527993 | cssa22h1orf116 | coding | upstream | 34971 | 53581935 ~ 53637160 (+) |
| LOC110527995 | yod1 | coding | upstream | 50034 | 53569509 ~ 53574407 (+) |
| LOC110527992 | pfkfb2 | coding | upstream | 61250 | 53552308 ~ 53563191 (+) |
| LOC110527990 | LOC106583000 | coding | upstream | 78250 | 53530233 ~ 53546191 (+) |
| LOC110527987 | NA | coding | upstream | 289927 | 53305471 ~ 53334514 (+) |
| LOC110527998 | ppb | coding | downstream | 106203 | 53731955 ~ 53750439 (+) |
| LOC110527122 | LOC106582938 | coding | downstream | 175566 | 53801318 ~ 53815919 (+) |
| LOC110528000 | LOC106582986 | coding | downstream | 264623 | 53890375 ~ 54051092 (+) |
| lrrc38b | LOC106582984 | coding | downstream | 450774 | 54076526 ~ 54100144 (+) |
| aadacl4 | LOC106582981 | coding | downstream | 557470 | 54183222 ~ 54190652 (+) |
| G622706 | NA | non-coding | upstream | 97040 | 53524367 ~ 53527401 (+) |
| G622669 | NA | non-coding | upstream | 209643 | 53414510 ~ 53414798 (+) |
| G622662 | NA | non-coding | upstream | 212694 | 53405834 ~ 53411747 (+) |
| G622641 | NA | non-coding | upstream | 220495 | 53357391 ~ 53403946 (+) |
| G622538 | NA | non-coding | upstream | 475926 | 53148309 ~ 53148515 (+) |
| G622831 | NA | non-coding | downstream | 55321 | 53681073 ~ 53743473 (+) |
| G623183 | NA | non-coding | downstream | 130023 | 53755775 ~ 53756172 (+) |
| G623191 | NA | non-coding | downstream | 135770 | 53761522 ~ 53761727 (+) |
| G623196 | NA | non-coding | downstream | 138335 | 53764087 ~ 53764369 (+) |
| G623197 | NA | non-coding | downstream | 138671 | 53764423 ~ 53765244 (+) |
| G621695 | LOC106582949 | other | upstream | 1131201 | 52491168 ~ 52493240 (+) |
| G621650 | NA | other | upstream | 1232808 | 52391348 ~ 52391633 (+) |
| LOC110527970 | LOC106583026 | other | upstream | 2550434 | 50960494 ~ 51079129 (+) |
| G618712 | LOC106583033 | other | upstream | 3320209 | 50303430 ~ 50304232 (+) |
| tafa4b | LOC106583040 | other | upstream | 4004273 | 49571790 ~ 49620194 (+) |
| G623180 | NA | other | downstream | 128154 | 53753906 ~ 53754119 (+) |
| G624628 | NA | other | downstream | 1197885 | 54823637 ~ 54824199 (+) |
| G624962 | LOC106582975 | other | downstream | 1421544 | 55047296 ~ 55052688 (+) |
| LOC110528007 | LOC106582974 | other | downstream | 1444880 | 55053185 ~ 55074095 (+) |
| LOC110527126 | LOC106582962 | other | downstream | 1581909 | 55207615 ~ 55208708 (+) |
