G623176


Basic Information

Item Value
gene id G623176
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 53741354 ~ 53748563 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU708821
ggtaacagtacagagtcaaagtggagactatatacaggggggtaccagtacagagtcaatgtgcggggacaccggttagtcaaggtaattgaggtagaatgtacatgtaggtagagctaTTAAAGTCACTATGCATAGAATCATACCCAGATGACTGATACAGTGTGTCTACAAACAATCCATGGTTGTAAAATCATTCATTACTCACCAAAAATGGTGTTCCCTCTTGGTGTGTAGCCGCCGAAGTTGAACATGTGAGAGTGGTCAGCAGTGACGACAGTCATTGTGTCATAGATGCTGGTTATGAGGCCGGCACGGCCGATGGCCCGGTCCATCTCCACTGCCTCATGTAGGGCCTGCTTGGCTTTGCCCTCATGATGTCCGTGGTCGATGCGCCCCCCCTCCACCAGCAGGTAGAATCCCCTGGGGTTTTTCCTCAGGATCTTGATGGCCACctccaccatctctgtcagggaAGGATCTGTCTCAGTGTTTCTCTCCAGGTTGTAGGGCAGATCTCCCGGCTCAAACAGACCCAAAATGTAATCCACATTATTAGGATTTACTGATAGAAGTTCTCTCTTGTTCCATACATACTGGGCTTTCTTGTTTTTCATTCTGTTAGTCCACTCCTCCACCAAGTTCCTTCCATCTTTGCGGGTACCAAAATGTTTCTTATCTCCAGGATACTCCACATCTGACTGGTTTTTGGGGAACATgtacttcctccctcctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU708821 True 737 lncRNA 0.48 4 53741354 53748563

Neighbor

gene id symbol gene type direction distance location
LOC110527997 LOC106582992 coding downstream 8566 53704724 ~ 53732788 (-)
LOC110527996 NA coding downstream 37397 53636783 ~ 53703957 (-)
LOC110527991 LOC106582993 coding downstream 105076 53624264 ~ 53636278 (-)
LOC110527994 LOC106582994 coding downstream 117448 53613567 ~ 53623906 (-)
kif17 kif17 coding downstream 139201 53589838 ~ 53602153 (-)
LOC110527999 LOC106582948 coding upstream 17503 53766066 ~ 53771880 (-)
LOC110527121 LOC106582947 coding upstream 25792 53774355 ~ 53775511 (-)
LOC110527124 LOC106582988 coding upstream 71897 53820460 ~ 53835329 (-)
LOC110528002 LOC106582983 coding upstream 417988 54166551 ~ 54180404 (-)
LOC110528966 LOC106582980 coding upstream 446152 54194715 ~ 54198212 (-)
G623173 NA non-coding downstream 3546 53735048 ~ 53737808 (-)
G623018 LOC106581772 non-coding downstream 328166 53412930 ~ 53413188 (-)
G623013 NA non-coding downstream 329611 53406030 ~ 53411743 (-)
LOC118965299 NA non-coding downstream 367973 53368443 ~ 53373429 (-)
G623177 NA non-coding upstream 2346 53750909 ~ 53751186 (-)
G623178 NA non-coding upstream 3108 53751671 ~ 53751956 (-)
G623179 NA non-coding upstream 3694 53752257 ~ 53752465 (-)
G623192 NA non-coding upstream 12748 53761311 ~ 53761586 (-)
G623198 NA non-coding upstream 16783 53765346 ~ 53765632 (-)
G622985 NA other downstream 418523 53305536 ~ 53322831 (-)
G619733 NA other downstream 2782814 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 3435198 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 3805073 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 4444106 49295040 ~ 49297305 (-)
G625426 NA other upstream 1323916 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 1415929 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 1684893 55420466 ~ 55566988 (-)
G627254 NA other upstream 2942760 56691323 ~ 56696091 (-)
G627314 NA other upstream 3086022 56834350 ~ 56835092 (-)

Expression


Co-expression Network