G623198



Basic Information


Item Value
gene id G623198
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 53765346 ~ 53765632 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU708843
gcacaaagcgaggtccatacagaaatggtttgtcgagatcggtgtggaaaaacttgactggccagcacagagccctgacctcaaagcctatcgaaaacctttgggatgaattggaacggcaACTACGAGCCAgtcctaatcacccaacatcagtgttcgatctcactaatgctcttgtggctgaatgggagcaagtccccgcagcaatgttccaacatctagtggaaagtcttcccagaagagtggaggctgatataGCAAGAAAGggcggaccaactccatattaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU708843 True 287 lncRNA 0.49 1 53765346 53765632

Neighbor


gene id symbol gene type direction distance location
LOC110527997 LOC106582992 coding downstream 32558 53704724 ~ 53732788 (-)
LOC110527996 NA coding downstream 61389 53636783 ~ 53703957 (-)
LOC110527991 LOC106582993 coding downstream 129068 53624264 ~ 53636278 (-)
LOC110527994 LOC106582994 coding downstream 141440 53613567 ~ 53623906 (-)
kif17 kif17 coding downstream 163193 53589838 ~ 53602153 (-)
LOC110527999 LOC106582948 coding upstream 434 53766066 ~ 53771880 (-)
LOC110527121 LOC106582947 coding upstream 8723 53774355 ~ 53775511 (-)
LOC110527124 LOC106582988 coding upstream 54828 53820460 ~ 53835329 (-)
LOC110528002 LOC106582983 coding upstream 400919 54166551 ~ 54180404 (-)
LOC110528966 LOC106582980 coding upstream 429083 54194715 ~ 54198212 (-)
G623192 NA non-coding downstream 3760 53761311 ~ 53761586 (-)
G623179 NA non-coding downstream 12881 53752257 ~ 53752465 (-)
G623178 NA non-coding downstream 13390 53751671 ~ 53751956 (-)
G623177 NA non-coding downstream 14160 53750909 ~ 53751186 (-)
G623176 NA non-coding downstream 16783 53741354 ~ 53748563 (-)
G623240 LOC106582938 non-coding upstream 36275 53801907 ~ 53802189 (-)
G623496 NA non-coding upstream 156390 53922022 ~ 53922229 (-)
G623497 NA non-coding upstream 156708 53922340 ~ 53922590 (-)
G623515 NA non-coding upstream 189621 53955253 ~ 53955463 (-)
G623523 NA non-coding upstream 199203 53964835 ~ 53965052 (-)
G622985 NA other downstream 442515 53305536 ~ 53322831 (-)
G619733 NA other downstream 2806806 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 3459190 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 3829065 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 4468098 49295040 ~ 49297305 (-)
G625426 NA other upstream 1306847 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 1398860 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 1667824 55420466 ~ 55566988 (-)
G627254 NA other upstream 2925691 56691323 ~ 56696091 (-)
G627314 NA other upstream 3068953 56834350 ~ 56835092 (-)

Expression



Co-expression Network