Gene
RNA
| Item | Value |
|---|---|
| gene id | G623217 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 53783781 ~ 53787584 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU708862 | True | 348 | lncRNA | 0.36 | 2 | 53783781 | 53787584 |
53,780,000
53,781,000
53,782,000
53,783,000
53,784,000
53,785,000
53,786,000
53,787,000
53,788,000
53,789,000
53,790,000
53,791,000
NC_048571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527998 | ppb | coding | upstream | 33342 | 53731955 ~ 53750439 (+) |
| LOC110527993 | cssa22h1orf116 | coding | upstream | 194311 | 53581935 ~ 53637160 (+) |
| LOC110527995 | yod1 | coding | upstream | 209374 | 53569509 ~ 53574407 (+) |
| LOC110527992 | pfkfb2 | coding | upstream | 220590 | 53552308 ~ 53563191 (+) |
| LOC110527990 | LOC106583000 | coding | upstream | 237590 | 53530233 ~ 53546191 (+) |
| LOC110527122 | LOC106582938 | coding | downstream | 13734 | 53801318 ~ 53815919 (+) |
| LOC110528000 | LOC106582986 | coding | downstream | 102791 | 53890375 ~ 54051092 (+) |
| lrrc38b | LOC106582984 | coding | downstream | 288942 | 54076526 ~ 54100144 (+) |
| aadacl4 | LOC106582981 | coding | downstream | 395638 | 54183222 ~ 54190652 (+) |
| LOC110528007 | LOC106582974 | coding | downstream | 1265601 | 55053185 ~ 55074095 (+) |
| G623197 | NA | non-coding | upstream | 18537 | 53764423 ~ 53765244 (+) |
| G623196 | NA | non-coding | upstream | 19412 | 53764087 ~ 53764369 (+) |
| G623191 | NA | non-coding | upstream | 22054 | 53761522 ~ 53761727 (+) |
| G623183 | NA | non-coding | upstream | 27609 | 53755775 ~ 53756172 (+) |
| G622831 | NA | non-coding | upstream | 40308 | 53681073 ~ 53743473 (+) |
| G623223 | NA | non-coding | downstream | 3681 | 53791265 ~ 53791489 (+) |
| G623244 | NA | non-coding | downstream | 18513 | 53806097 ~ 53806386 (+) |
| G623337 | NA | non-coding | downstream | 124945 | 53912529 ~ 53913129 (+) |
| G623349 | NA | non-coding | downstream | 143158 | 53930742 ~ 53940176 (+) |
| G623180 | NA | other | upstream | 29662 | 53753906 ~ 53754119 (+) |
| G621695 | LOC106582949 | other | upstream | 1290541 | 52491168 ~ 52493240 (+) |
| G621650 | NA | other | upstream | 1392148 | 52391348 ~ 52391633 (+) |
| LOC110527970 | LOC106583026 | other | upstream | 2709774 | 50960494 ~ 51079129 (+) |
| G618712 | LOC106583033 | other | upstream | 3479549 | 50303430 ~ 50304232 (+) |
| G624628 | NA | other | downstream | 1036053 | 54823637 ~ 54824199 (+) |
| G624962 | LOC106582975 | other | downstream | 1259712 | 55047296 ~ 55052688 (+) |
| LOC110527126 | LOC106582962 | other | downstream | 1420077 | 55207615 ~ 55208708 (+) |
| G625038 | NA | other | downstream | 1424121 | 55211705 ~ 55213911 (+) |
