XLOC_025436


Basic Information

Item Value
gene id XLOC_025436
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 30868418 ~ 30873160 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052711
cagcataTCAATAAAAGACGTCATTATTAATCGGTATATTGTAGGTCCAGATCCACTGTACCGTCAGTCACCACAAGCCTCAGTCTCTTAGGCTTGCGATCTGTTATGGGGGTGCTTTGAGAGTGGGAGGTGGTAAAGTGTACAGAATTATATGGGTGAGTTCCAGGCTGCTGAGTCTGCTGAGGATCCTTACAAATTTGGCCTCCATGGACTTTAGACCCAGGACACCTACTCACAGGTGTAGAAGGCGAGAAGTTTGAGGGACCACACGCTTCAACAACCAGCCTTCCTTGAGTTCCTGAAGGCTCCATAAGACAATGATAAGTGTAATTTGCAGGACCTGAACCAGTGTAATTCGAGCGTTCACCATCCTCGCTGTATCCAAGGGTGAGAGAATGATCTCCGGTGAAGTTCACAACATAAGACTGTTGAGGATGTTGACTGTTTTCAAAAGTGGATGACTGTGTTTTACTTAGTGGGGCCTCATGGATCAGAGATTCTCTGTAGCCCAGATGAGGACTGTTGTGCTGTGACACAGGAGATGTAAGAGACGAGCTGAAGTTATAATCAGAAGGATCACAGTGAGAAATGCTAGCACAGACATCAACAAATTCTTTCACAACAGGCTGTGTGACTATATTTTTGCCAATCTCTAAATCGCATGTTACTTTTAAGTACTTATCTGCACTTTCCACATTTACTGGTGTGAAATATAACTCCTTCACCCCTTTCTTACCTTGTTTATTGCATTCTGCACTCACATCTAACATTGTGCTCTGCTGCACTGATGCTGCTGCCGTACCATTCTCTCTACTGTCTCTCTCTGCCTGCTCTGTACTTTCAATCTCTGGTTTTCCTGGGATAGCCACCCTGACCAGACTGACTCTGAGGTGACGATTTAGCCCTGAGAGGAAAGAGACAGGGCTGGTAAGAGATGGTGAAGACAAGGAGGGCATAACGCTTACAGCACTAGAAGAGACAGGCTGCCTGTGGATTTGCTTGTCATCCCCTGAGGTCTCTGAAGCTGCACAAGAACTAACATCACCTTCCCTAGGAGCAATAGAACCACAGATGTGTTTCACGTCACCTGCCACTTCCCTGAGGCGATCCCTAAAGACTCTCTGCTGTGTCTCTCTGATCACTGTACTCTCTGTTTGTAATGATTTGTCATTGTTAGTTCCAGCATCTTCATTGAGGTGTACATTTTTATCGGTACATGATATACCTGGAGACACTAGCAGAGGATCAGTAATGTCCCAAGACTCAacctcattttctttttgccattTCCTATCTTTTGTTTGGGCGCCAGAGCATTCATTTCGGACTTTAGAAAGTTTAGAGTTTGAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052711 True 1350 lncRNA 0.45 2 30868418 30873160

Neighbor

gene id symbol gene type direction distance location
XLOC_025435 NA coding upstream 172611 30694174 ~ 30695807 (+)
XLOC_025434 NA coding upstream 212860 30643162 ~ 30655558 (+)
XLOC_025432 NA coding upstream 362269 30497721 ~ 30506149 (+)
XLOC_025433 si:dkey-13n23.3 coding upstream 363999 30500968 ~ 30504419 (+)
XLOC_025431 CR936968.2 coding upstream 512831 30354768 ~ 30355587 (+)
XLOC_025437 NA coding downstream 34732 30907892 ~ 30908126 (+)
XLOC_025438 cldni coding downstream 48086 30921246 ~ 30927002 (+)
XLOC_025439 NA coding downstream 70128 30943288 ~ 30948454 (+)
XLOC_025440 prf1.9 coding downstream 95016 30968176 ~ 30975502 (+)
XLOC_025441 prf1.1 coding downstream 107692 30980852 ~ 30988333 (+)
XLOC_025429 BX649540.1 misc upstream 619382 30248739 ~ 30249036 (+)
XLOC_025426 NA non-coding upstream 901348 29966783 ~ 29967070 (+)
XLOC_025446 NA non-coding downstream 224773 31097933 ~ 31105653 (+)
XLOC_025447 NA non-coding downstream 296059 31169219 ~ 31170874 (+)
XLOC_025449 NA non-coding downstream 358649 31231809 ~ 31239563 (+)

Expression


Co-expression Network