XLOC_025437


Basic Information

Item Value
gene id XLOC_025437
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 30907892 ~ 30908126 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052348
AGCCCATCTGTGCTGTGTTTTGCAATGTTTACCCTCAATAGGAATAGGCAAGCATCAAGTACAAAAGACATCCCTAATGCCACCAAAGAGATACAAAAATATGTTCCCAATGTCTTAAGGCCATAATTAAAGATGAAGCATTAATTCTTTCTTGCTTACAACACATTTTAACTCAACAGAAAtaattgcaaaagaaaaaaatgtaaacaatgtgaTGAGTTGTCTTCCAAATAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052348 True 235 lncRNA 0.33 1 30907892 30908126

Neighbor

gene id symbol gene type direction distance location
XLOC_025436 NA coding upstream 34732 30868418 ~ 30873160 (+)
XLOC_025435 NA coding upstream 212085 30694174 ~ 30695807 (+)
XLOC_025434 NA coding upstream 252334 30643162 ~ 30655558 (+)
XLOC_025432 NA coding upstream 401743 30497721 ~ 30506149 (+)
XLOC_025433 si:dkey-13n23.3 coding upstream 403473 30500968 ~ 30504419 (+)
XLOC_025438 cldni coding downstream 13120 30921246 ~ 30927002 (+)
XLOC_025439 NA coding downstream 35162 30943288 ~ 30948454 (+)
XLOC_025440 prf1.9 coding downstream 60050 30968176 ~ 30975502 (+)
XLOC_025441 prf1.1 coding downstream 72726 30980852 ~ 30988333 (+)
XLOC_025442 cox6a2 coding downstream 131797 31039923 ~ 31042102 (+)
XLOC_025429 BX649540.1 misc upstream 658856 30248739 ~ 30249036 (+)
XLOC_025431 CR936968.2 non-coding upstream 552305 30354768 ~ 30355587 (+)
XLOC_025446 NA non-coding downstream 189807 31097933 ~ 31105653 (+)
XLOC_025447 NA non-coding downstream 261093 31169219 ~ 31170874 (+)
XLOC_025449 NA non-coding downstream 323683 31231809 ~ 31239563 (+)
XLOC_025455 BX324157.1 non-coding downstream 880395 31788521 ~ 31788637 (+)

Expression


Co-expression Network