Gene
RNA
| Item | Value |
|---|---|
| gene id | G623746 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 54159656 ~ 54159945 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Short-chain dehydrogenase/reductase 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU709406 | True | 290 | lncRNA | 0.39 | 1 | 54159656 | 54159945 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527124 | LOC106582988 | coding | downstream | 324327 | 53820460 ~ 53835329 (-) |
| LOC110527121 | LOC106582947 | coding | downstream | 384145 | 53774355 ~ 53775511 (-) |
| LOC110527999 | LOC106582948 | coding | downstream | 387776 | 53766066 ~ 53771880 (-) |
| LOC110527997 | LOC106582992 | coding | downstream | 426868 | 53704724 ~ 53732788 (-) |
| LOC110527996 | NA | coding | downstream | 455699 | 53636783 ~ 53703957 (-) |
| LOC110528002 | LOC106582983 | coding | upstream | 6606 | 54166551 ~ 54180404 (-) |
| LOC110528966 | LOC106582980 | coding | upstream | 34770 | 54194715 ~ 54198212 (-) |
| LOC110528004 | LOC106582978 | coding | upstream | 42729 | 54202674 ~ 54485213 (-) |
| LOC110528967 | LOC106565901 | coding | upstream | 647704 | 54807649 ~ 54961056 (-) |
| LOC110528005 | LOC106582976 | coding | upstream | 838496 | 54998441 ~ 55036498 (-) |
| G623716 | NA | non-coding | downstream | 8918 | 54150494 ~ 54150738 (-) |
| G623592 | NA | non-coding | downstream | 100747 | 54058636 ~ 54058909 (-) |
| G623590 | NA | non-coding | downstream | 103683 | 54055747 ~ 54055973 (-) |
| G623587 | NA | non-coding | downstream | 107806 | 54051645 ~ 54051850 (-) |
| G623559 | NA | non-coding | downstream | 108578 | 54045849 ~ 54051078 (-) |
| G623767 | NA | non-coding | upstream | 25476 | 54185421 ~ 54186796 (-) |
| G623771 | NA | non-coding | upstream | 30890 | 54190835 ~ 54191921 (-) |
| G624025 | NA | non-coding | upstream | 102735 | 54262680 ~ 54264094 (-) |
| G624055 | NA | non-coding | upstream | 172604 | 54332549 ~ 54332911 (-) |
| G622985 | NA | other | downstream | 836825 | 53305536 ~ 53322831 (-) |
| G619733 | NA | other | downstream | 3201116 | 50956271 ~ 50958540 (-) |
| LOC110527964 | LOC106583033 | other | downstream | 3853500 | 50300364 ~ 50306278 (-) |
| LOC110527961 | LOC106565835 | other | downstream | 4223375 | 49660022 ~ 49936575 (-) |
| mustn1b | mstn1 | other | downstream | 4862408 | 49295040 ~ 49297305 (-) |
| G625426 | NA | other | upstream | 912534 | 55072479 ~ 55075396 (-) |
| G625472 | LOC106582968 | other | upstream | 1004547 | 55164492 ~ 55188756 (-) |
| LOC110528020 | LOC106582955 | other | upstream | 1273511 | 55420466 ~ 55566988 (-) |
| G627254 | NA | other | upstream | 2531378 | 56691323 ~ 56696091 (-) |
| G627314 | NA | other | upstream | 2674640 | 56834350 ~ 56835092 (-) |
