G623767


Basic Information

Item Value
gene id G623767
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 54185421 ~ 54186796 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU709427
gttttatatgggctatgatgggaccCGATCATTTTTCTAATCAGTCATACAGTAAAAAATAATCCTGGCTCTAGGGAGGATGAAAACATGAAAACCTTTTTCACAGACAGAGACAACAAATGTGATTGGTTAAAAACTAACGAGGCTGAGCTTGCTGTATGCAAGGTTGCATTGTGTCGGCCTTTGCACCTGTAACTAAAAAGATAGTCAGACAGGATATCATCACTATTGTGTTGATTGATTAATTCCAGACAATAATTTGGTATTAAAAAGGCCTAGGTAGCATAGCCAACCGAAGTGTGAATATAAGCAaaatcacattcacattttctcagaACACAAATAAATGGGCCTATTTTAGGCTATAAATACATCATTTAGGCTATGAAAACATGATGTTACATTTCCCCTGGCCAGGTCCAGATGGGATCAGAGCGCATAGGcttctctaggctacctgcagctgtggttgttatcAGTAGGCTATTGCTGATCAGACTGAAGCACAGACTAATTGTGCATGTTGACAAATCATGTGGCATGATATGTCAACATTTATATGGCTTCCATATAAAACAGCTCTTCACAGTGAATTCACCTATACCCACGTTTTCAGTTGCAAATGGATTTCACCACGTAAGGATTTGCATGATGTTGATAAAAATGAAGACTGGTGTACATTTAgatgacattttagtaattttgttgtaactTTGTAAGGTAGGTTTCCTGTACTTTTAAATTCTTATGAGGGTTAATTGTTCATTATTGATAGGTTAACGGTACTGAAGACATCCATTATAGCAATTCTGTGCTTTTGTCTTGAAGCTaaactgtagcctacagacaagAAAATAAACCCTGTAATTGTCTGCACATACATGCTTGTGAATTGTTGCAatattcaagagtgtaatacaGGGAATAGGGCCATAATGACACCATGACAGAGTTAAGGTTTTACCAATAGGTGGACTTTGTATTGACTCCAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU709427 True 995 lncRNA 0.37 2 54185421 54186796

Neighbor

gene id symbol gene type direction distance location
LOC110528002 LOC106582983 coding downstream 5017 54166551 ~ 54180404 (-)
LOC110527124 LOC106582988 coding downstream 350092 53820460 ~ 53835329 (-)
LOC110527121 LOC106582947 coding downstream 409910 53774355 ~ 53775511 (-)
LOC110527999 LOC106582948 coding downstream 413541 53766066 ~ 53771880 (-)
LOC110527997 LOC106582992 coding downstream 452633 53704724 ~ 53732788 (-)
LOC110528966 LOC106582980 coding upstream 7919 54194715 ~ 54198212 (-)
LOC110528004 LOC106582978 coding upstream 15878 54202674 ~ 54485213 (-)
LOC110528967 LOC106565901 coding upstream 620853 54807649 ~ 54961056 (-)
LOC110528005 LOC106582976 coding upstream 811645 54998441 ~ 55036498 (-)
LOC110528006 LOC106582975 coding upstream 860497 55047293 ~ 55052787 (-)
G623746 NA non-coding downstream 25476 54159656 ~ 54159945 (-)
G623716 NA non-coding downstream 34683 54150494 ~ 54150738 (-)
G623592 NA non-coding downstream 126512 54058636 ~ 54058909 (-)
G623590 NA non-coding downstream 129448 54055747 ~ 54055973 (-)
G623587 NA non-coding downstream 133571 54051645 ~ 54051850 (-)
G623771 NA non-coding upstream 4039 54190835 ~ 54191921 (-)
G624025 NA non-coding upstream 75884 54262680 ~ 54264094 (-)
G624055 NA non-coding upstream 145753 54332549 ~ 54332911 (-)
G624191 LOC100136012 non-coding upstream 314826 54501622 ~ 54501860 (-)
G622985 NA other downstream 862590 53305536 ~ 53322831 (-)
G619733 NA other downstream 3226881 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 3879265 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 4249140 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 4888173 49295040 ~ 49297305 (-)
G625426 NA other upstream 885683 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 977696 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 1246660 55420466 ~ 55566988 (-)
G627254 NA other upstream 2504527 56691323 ~ 56696091 (-)
G627314 NA other upstream 2647789 56834350 ~ 56835092 (-)

Expression


Co-expression Network