Gene
RNA
| Item | Value |
|---|---|
| gene id | G624839 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 54894120 ~ 54894513 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 3, axonemal, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU710542 | True | 394 | lncRNA | 0.43 | 1 | 54894120 | 54894513 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528004 | LOC106582978 | coding | downstream | 408907 | 54202674 ~ 54485213 (-) |
| LOC110528966 | LOC106582980 | coding | downstream | 695908 | 54194715 ~ 54198212 (-) |
| LOC110528002 | LOC106582983 | coding | downstream | 713716 | 54166551 ~ 54180404 (-) |
| LOC110527124 | LOC106582988 | coding | downstream | 1058791 | 53820460 ~ 53835329 (-) |
| LOC110527121 | LOC106582947 | coding | downstream | 1118609 | 53774355 ~ 53775511 (-) |
| LOC110528005 | LOC106582976 | coding | upstream | 103928 | 54998441 ~ 55036498 (-) |
| LOC110528006 | LOC106582975 | coding | upstream | 152780 | 55047293 ~ 55052787 (-) |
| LOC110528008 | atrap | coding | upstream | 185471 | 55079890 ~ 55101228 (-) |
| LOC110528010 | LOC106582973 | coding | upstream | 212236 | 55106749 ~ 55132386 (-) |
| LOC110528009 | LOC106582972 | coding | upstream | 238282 | 55132795 ~ 55158158 (-) |
| G624838 | NA | non-coding | downstream | 94 | 54893821 ~ 54894026 (-) |
| G624831 | NA | non-coding | downstream | 5863 | 54887938 ~ 54888257 (-) |
| G624828 | NA | non-coding | downstream | 9009 | 54884586 ~ 54885111 (-) |
| G624827 | NA | non-coding | downstream | 12238 | 54881666 ~ 54881882 (-) |
| G624826 | NA | non-coding | downstream | 13322 | 54880551 ~ 54880798 (-) |
| G624841 | NA | non-coding | upstream | 4180 | 54898693 ~ 54898892 (-) |
| G624845 | NA | non-coding | upstream | 8030 | 54902543 ~ 54906438 (-) |
| G624849 | NA | non-coding | upstream | 14061 | 54908574 ~ 54908960 (-) |
| G624850 | NA | non-coding | upstream | 15358 | 54909871 ~ 54910144 (-) |
| G624851 | NA | non-coding | upstream | 15812 | 54910325 ~ 54910598 (-) |
| G622985 | NA | other | downstream | 1571289 | 53305536 ~ 53322831 (-) |
| G619733 | NA | other | downstream | 3935580 | 50956271 ~ 50958540 (-) |
| LOC110527964 | LOC106583033 | other | downstream | 4587964 | 50300364 ~ 50306278 (-) |
| LOC110527961 | LOC106565835 | other | downstream | 4957839 | 49660022 ~ 49936575 (-) |
| mustn1b | mstn1 | other | downstream | 5596872 | 49295040 ~ 49297305 (-) |
| G625426 | NA | other | upstream | 177966 | 55072479 ~ 55075396 (-) |
| G625472 | LOC106582968 | other | upstream | 269979 | 55164492 ~ 55188756 (-) |
| LOC110528020 | LOC106582955 | other | upstream | 538943 | 55420466 ~ 55566988 (-) |
| G627254 | NA | other | upstream | 1796810 | 56691323 ~ 56696091 (-) |
| G627314 | NA | other | upstream | 1940072 | 56834350 ~ 56835092 (-) |
