G624864


Basic Information

Item Value
gene id G624864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 54926722 ~ 54927112 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU710570
TAGCTTATACAGATAACTTCAAAATTATTGTGACAGTGACACATGAAATGATACGATGACTATGAGGGTAAAATGCTGTCAGCTTTAATATAAGGGTACtttcatccatattgggtgaaccgtCTAAAAATTACAGCATTTTATGGACATAGTCCTCCCATTTTAGggaaccaaaagtattgggacaaattcacttgtgtattaaagtagtagaATCTAAGCACTTGGTCTCATATtactagcacacaatgactacattatGCTTGTCACTCTACAAACTTGCAaaaatgcatttgctgtttgttttggttgtgtttcagatcattTTGTACCCAATAGAAATACTGTAAATGGCTAAAAATGTATAGTGTCCTTTTGGAGTCTTATtttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU710570 True 391 lncRNA 0.34 1 54926722 54927112

Neighbor

gene id symbol gene type direction distance location
LOC110528004 LOC106582978 coding downstream 441509 54202674 ~ 54485213 (-)
LOC110528966 LOC106582980 coding downstream 728510 54194715 ~ 54198212 (-)
LOC110528002 LOC106582983 coding downstream 746318 54166551 ~ 54180404 (-)
LOC110527124 LOC106582988 coding downstream 1091393 53820460 ~ 53835329 (-)
LOC110527121 LOC106582947 coding downstream 1151211 53774355 ~ 53775511 (-)
LOC110528005 LOC106582976 coding upstream 71329 54998441 ~ 55036498 (-)
LOC110528006 LOC106582975 coding upstream 120181 55047293 ~ 55052787 (-)
LOC110528008 atrap coding upstream 152872 55079890 ~ 55101228 (-)
LOC110528010 LOC106582973 coding upstream 179637 55106749 ~ 55132386 (-)
LOC110528009 LOC106582972 coding upstream 205683 55132795 ~ 55158158 (-)
G624861 NA non-coding downstream 2068 54924433 ~ 54924654 (-)
G624858 NA non-coding downstream 8528 54917905 ~ 54918194 (-)
G624852 NA non-coding downstream 15837 54910641 ~ 54910885 (-)
G624851 NA non-coding downstream 16124 54910325 ~ 54910598 (-)
G624850 NA non-coding downstream 16578 54909871 ~ 54910144 (-)
G624871 NA non-coding upstream 8598 54935710 ~ 54935934 (-)
G624872 NA non-coding upstream 8918 54936030 ~ 54936257 (-)
G624878 NA non-coding upstream 20369 54947481 ~ 54947716 (-)
G624879 NA non-coding upstream 21131 54948243 ~ 54948464 (-)
G624882 NA non-coding upstream 27438 54954550 ~ 54954839 (-)
G622985 NA other downstream 1603891 53305536 ~ 53322831 (-)
G619733 NA other downstream 3968182 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 4620566 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 4990441 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 5629474 49295040 ~ 49297305 (-)
G625426 NA other upstream 145367 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 237380 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 506344 55420466 ~ 55566988 (-)
G627254 NA other upstream 1764211 56691323 ~ 56696091 (-)
G627314 NA other upstream 1907473 56834350 ~ 56835092 (-)

Expression


Co-expression Network