Gene
RNA
| Item | Value |
|---|---|
| gene id | G624778 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 54974192 ~ 54974438 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| rho guanine nucleotide exchange factor 10-like protein isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU710478 | True | 247 | lncRNA | 0.51 | 1 | 54974192 | 54974438 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528967 | LOC106565901 | coding | downstream | 13136 | 54807649 ~ 54961056 (-) |
| LOC110528004 | LOC106582978 | coding | downstream | 488979 | 54202674 ~ 54485213 (-) |
| LOC110528966 | LOC106582980 | coding | downstream | 775980 | 54194715 ~ 54198212 (-) |
| LOC110528002 | LOC106582983 | coding | downstream | 793788 | 54166551 ~ 54180404 (-) |
| LOC110527124 | LOC106582988 | coding | downstream | 1138863 | 53820460 ~ 53835329 (-) |
| LOC110528005 | LOC106582976 | coding | upstream | 24003 | 54998441 ~ 55036498 (-) |
| LOC110528006 | LOC106582975 | coding | upstream | 72855 | 55047293 ~ 55052787 (-) |
| LOC110528008 | atrap | coding | upstream | 105546 | 55079890 ~ 55101228 (-) |
| LOC110528010 | LOC106582973 | coding | upstream | 132311 | 55106749 ~ 55132386 (-) |
| LOC110528009 | LOC106582972 | coding | upstream | 158357 | 55132795 ~ 55158158 (-) |
| G624892 | NA | non-coding | downstream | 2210 | 54971726 ~ 54971982 (-) |
| G624889 | NA | non-coding | downstream | 5321 | 54968666 ~ 54968871 (-) |
| G624882 | NA | non-coding | downstream | 19353 | 54954550 ~ 54954839 (-) |
| G624879 | NA | non-coding | downstream | 25728 | 54948243 ~ 54948464 (-) |
| G624878 | NA | non-coding | downstream | 26476 | 54947481 ~ 54947716 (-) |
| G625410 | NA | non-coding | upstream | 68017 | 55042455 ~ 55042874 (-) |
| G625404 | NA | non-coding | upstream | 69751 | 55044189 ~ 55046091 (-) |
| G625414 | NA | non-coding | upstream | 123305 | 55097743 ~ 55098277 (-) |
| LOC110528015 | NA | non-coding | upstream | 186567 | 55160922 ~ 55162246 (-) |
| G622985 | NA | other | downstream | 1651361 | 53305536 ~ 53322831 (-) |
| G619733 | NA | other | downstream | 4015652 | 50956271 ~ 50958540 (-) |
| LOC110527964 | LOC106583033 | other | downstream | 4668036 | 50300364 ~ 50306278 (-) |
| LOC110527961 | LOC106565835 | other | downstream | 5037911 | 49660022 ~ 49936575 (-) |
| mustn1b | mstn1 | other | downstream | 5676944 | 49295040 ~ 49297305 (-) |
| G625426 | NA | other | upstream | 98041 | 55072479 ~ 55075396 (-) |
| G625472 | LOC106582968 | other | upstream | 190054 | 55164492 ~ 55188756 (-) |
| LOC110528020 | LOC106582955 | other | upstream | 459018 | 55420466 ~ 55566988 (-) |
| G627254 | NA | other | upstream | 1716885 | 56691323 ~ 56696091 (-) |
| G627314 | NA | other | upstream | 1860147 | 56834350 ~ 56835092 (-) |
