G625404


Basic Information

Item Value
gene id G625404
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 55044189 ~ 55046091 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU711162
ACACATTTTTACTCCTCAGTAATACTTATTCACTCGTGACATTTCAgcgttttattttttattaatttgttaacattttgaaaaacaattccactgacattatggggtattgtgtgaaaaaatatatttaatacaatTTTAAATTTGGGCTGTAAGACAAccaaatatggaaaaagtcaaggggcatgaatactttctgaaggcactgtaaatgcaaaAAGTGATATTGTGTCTTataaggtcctaaacgatataaccgccatcgataaaagagtactgtgcagccgtctacatcgacctggccaaggcttcttatcggtagactcaatagccttggtttatcaaatgactgcctcgtctggttctccaactacttctcagatagagtttagtgtgtcaaatcggagagcctgttgtccggacctctggcagagTCTAttggtgtgccacagggttcaattctcaggccgactcttttctctgcatatatcaatgatgtcgctcttgctgctggtgattctctgatccacctctacgcagatgacaccattctgtatacttctggcccctctttggacactgtgttaactaaactccagacgagtttcaatgccatgtaacactccttccgtggcctccaactgctcttaaattcttgtaaaactaaatgcatattCATTAACCGCTCGCTGCCTgcacctagcatcactactctgggcggttctgacttagaatatgtggactacaaatacctaggtgtctggttagaccgtaaactctcattccagactcacattaaacatctccaatccaaaattaaatctagaatcggcttcctatttcgcaacaaagcctccttcacatactgctaaacataccctcgtaaaactgactctcctaccgatccttgacttcggcgatgtcatttacaaaatagcctccaacactctgcgacctgtatgctctcgttggttggccctcgcttcatattcgttgccaaacccactggctccaggtcatctataagtctttgctatttaaagccccgccttatctcagctcactggtcaccattgcaacacccacccgtaccacacgctccagcaggtatatttcactgctcatcaccaaagccaactcctctggcctcctttcctttcagttctctgctgccaatgactggaacgaattgcaaaaatcactgaagctggagactgatatctccctcactaaatttaatcatcagctgtcagagctgcttaccgatcattgcacctgtacactgcccatctgtaaatagcccacccacccaactacctcatccccatattgttatttattttttgctattttgcaccccagtatctctacttgcacatcatcatttgcacatctatcactccagtgttaatgctaaattgtaattattttgccactatggcctatttattgccttacctccctaatcttactacatttgcacacaccgtatatagatctttctattgtgttatttactGAACGTTTCTTTAtcccatgtgtaagtctgtgttgtttttgtcatactgctttgctttatcttggccaggtcgcagttgtaaatgagaacttgttctcaacaggcctacctggttaaataaaaaattataaaataatAGCACAGAGCTTTCCAAGAAAACAATTTAgacatttatggtctgtttacatattttttagaggctatttatacaGAACATGTGTATAAAACCGgtataaactgtatttataattatatgaaaatattttaggttgacaatTGTGTTACACAATTTCTGATACACCTTCCTTTTACATAATCCAGAAAAATCTGGATTATGCCTCTGCCcttcattccaattagactggtttggatttctccctggcT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU711162 True 1903 lncRNA 0.40 1 55044189 55046091
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528005 LOC106582976 coding downstream 7691 54998441 ~ 55036498 (-)
LOC110528967 LOC106565901 coding downstream 83133 54807649 ~ 54961056 (-)
LOC110528004 LOC106582978 coding downstream 558976 54202674 ~ 54485213 (-)
LOC110528966 LOC106582980 coding downstream 845977 54194715 ~ 54198212 (-)
LOC110528002 LOC106582983 coding downstream 863785 54166551 ~ 54180404 (-)
LOC110528006 LOC106582975 coding upstream 1202 55047293 ~ 55052787 (-)
LOC110528008 atrap coding upstream 33893 55079890 ~ 55101228 (-)
LOC110528010 LOC106582973 coding upstream 60658 55106749 ~ 55132386 (-)
LOC110528009 LOC106582972 coding upstream 86704 55132795 ~ 55158158 (-)
LOC110528015 NA coding upstream 114831 55160922 ~ 55162246 (-)
G625410 NA non-coding downstream 1315 55042455 ~ 55042874 (-)
G624778 NA non-coding downstream 69751 54974192 ~ 54974438 (-)
G624892 NA non-coding downstream 72207 54971726 ~ 54971982 (-)
G624889 NA non-coding downstream 75318 54968666 ~ 54968871 (-)
G624882 NA non-coding downstream 89350 54954550 ~ 54954839 (-)
G625414 NA non-coding upstream 51652 55097743 ~ 55098277 (-)
G625477 NA non-coding upstream 124303 55170394 ~ 55170660 (-)
G625472 LOC106582968 non-coding upstream 124971 55164492 ~ 55188756 (-)
G622985 NA other downstream 1721358 53305536 ~ 53322831 (-)
G619733 NA other downstream 4085649 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 4738033 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 5107908 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 5746941 49295040 ~ 49297305 (-)
G625426 NA other upstream 26388 55072479 ~ 55075396 (-)
LOC110528020 LOC106582955 other upstream 387365 55420466 ~ 55566988 (-)
G627254 NA other upstream 1645232 56691323 ~ 56696091 (-)
G627314 NA other upstream 1788494 56834350 ~ 56835092 (-)

Expression

G625404 Expression in all Baseline Samples

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G625404 Expression in each Bioproject

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G625404 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network