Gene
RNA
| Item | Value |
|---|---|
| gene id | G625042 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 55164275 ~ 55171714 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106565908 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU710777 | False | 1017 | lncRNA | 0.41 | 2 | 55164275 | 55165407 |
| TU710779 | True | 738 | lncRNA | 0.47 | 3 | 55164275 | 55171714 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528007 | LOC106582974 | coding | upstream | 90180 | 55053185 ~ 55074095 (+) |
| aadacl4 | LOC106582981 | coding | upstream | 973623 | 54183222 ~ 54190652 (+) |
| lrrc38b | LOC106582984 | coding | upstream | 1064131 | 54076526 ~ 54100144 (+) |
| LOC110528000 | LOC106582986 | coding | upstream | 1113183 | 53890375 ~ 54051092 (+) |
| LOC110527122 | LOC106582938 | coding | upstream | 1348356 | 53801318 ~ 53815919 (+) |
| LOC118965383 | NA | coding | downstream | 6993 | 55178707 ~ 55179794 (+) |
| LOC110528014 | NA | coding | downstream | 21779 | 55193493 ~ 55195062 (+) |
| LOC110528013 | LOC106582964 | coding | downstream | 26056 | 55197770 ~ 55199068 (+) |
| LOC110527126 | LOC106582962 | coding | downstream | 35901 | 55207615 ~ 55208708 (+) |
| LOC110528019 | LOC106582960 | coding | downstream | 141734 | 55313448 ~ 55315903 (+) |
| G624999 | NA | non-coding | upstream | 60390 | 55103587 ~ 55103885 (+) |
| G624965 | NA | non-coding | upstream | 111185 | 55052712 ~ 55053090 (+) |
| G624961 | NA | non-coding | upstream | 120479 | 55043490 ~ 55043796 (+) |
| G624957 | NA | non-coding | upstream | 123588 | 55040335 ~ 55040687 (+) |
| G624902 | NA | non-coding | upstream | 171690 | 54992277 ~ 54992585 (+) |
| G625085 | NA | non-coding | downstream | 56963 | 55228677 ~ 55230776 (+) |
| G625086 | NA | non-coding | downstream | 62426 | 55234140 ~ 55234456 (+) |
| G625087 | NA | non-coding | downstream | 63026 | 55234740 ~ 55235046 (+) |
| G625088 | NA | non-coding | downstream | 63395 | 55235109 ~ 55235333 (+) |
| G624962 | LOC106582975 | other | upstream | 111587 | 55047296 ~ 55052688 (+) |
| G624628 | NA | other | upstream | 340076 | 54823637 ~ 54824199 (+) |
| G623180 | NA | other | upstream | 1410156 | 53753906 ~ 53754119 (+) |
| G621695 | LOC106582949 | other | upstream | 2671035 | 52491168 ~ 52493240 (+) |
| G625038 | NA | other | downstream | 39991 | 55211705 ~ 55213911 (+) |
| G625222 | NA | other | downstream | 300754 | 55472468 ~ 55472843 (+) |
| LOC110528024 | LOC106583050 | other | downstream | 539959 | 55711635 ~ 55714713 (+) |
| G626004 | NA | other | downstream | 899340 | 56071054 ~ 56078929 (+) |
