Gene
RNA
| Item | Value |
|---|---|
| gene id | G625477 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 55170394 ~ 55170660 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU711271 | True | 223 | lncRNA | 0.41 | 2 | 55170394 | 55170660 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528015 | NA | coding | downstream | 8148 | 55160922 ~ 55162246 (-) |
| LOC110528009 | LOC106582972 | coding | downstream | 12236 | 55132795 ~ 55158158 (-) |
| LOC110528010 | LOC106582973 | coding | downstream | 38008 | 55106749 ~ 55132386 (-) |
| LOC110528008 | atrap | coding | downstream | 69166 | 55079890 ~ 55101228 (-) |
| LOC110528006 | LOC106582975 | coding | downstream | 117607 | 55047293 ~ 55052787 (-) |
| LOC110528968 | LOC106582963 | coding | upstream | 25194 | 55195854 ~ 55196454 (-) |
| LOC110528016 | LOC106582964 | coding | upstream | 31479 | 55202139 ~ 55204250 (-) |
| LOC110528017 | LOC106582961 | coding | upstream | 38922 | 55209582 ~ 55225927 (-) |
| LOC110528018 | LOC106582958 | coding | upstream | 59061 | 55228600 ~ 55309126 (-) |
| LOC118965300 | NA | coding | upstream | 119867 | 55290527 ~ 55292821 (-) |
| G625414 | NA | non-coding | downstream | 72117 | 55097743 ~ 55098277 (-) |
| G625404 | NA | non-coding | downstream | 124303 | 55044189 ~ 55046091 (-) |
| G625410 | NA | non-coding | downstream | 127520 | 55042455 ~ 55042874 (-) |
| G625472 | LOC106582968 | non-coding | upstream | 402 | 55164492 ~ 55188756 (-) |
| G625531 | LOC106582960 | non-coding | upstream | 142844 | 55313504 ~ 55314949 (-) |
| G625560 | NA | non-coding | upstream | 189164 | 55359824 ~ 55360081 (-) |
| G625568 | NA | non-coding | upstream | 197980 | 55368640 ~ 55368849 (-) |
| G625426 | NA | other | downstream | 94998 | 55072479 ~ 55075396 (-) |
| G622985 | NA | other | downstream | 1847563 | 53305536 ~ 53322831 (-) |
| G619733 | NA | other | downstream | 4211854 | 50956271 ~ 50958540 (-) |
| LOC110527964 | LOC106583033 | other | downstream | 4864238 | 50300364 ~ 50306278 (-) |
| LOC110527961 | LOC106565835 | other | downstream | 5234113 | 49660022 ~ 49936575 (-) |
| LOC110528020 | LOC106582955 | other | upstream | 262796 | 55420466 ~ 55566988 (-) |
| G627254 | NA | other | upstream | 1520663 | 56691323 ~ 56696091 (-) |
| G627314 | NA | other | upstream | 1663925 | 56834350 ~ 56835092 (-) |
| G627323 | NA | other | upstream | 1676302 | 56846962 ~ 56852301 (-) |
| vamp3 | vamp3 | other | upstream | 1682907 | 56853567 ~ 56869607 (-) |
