G625199


Basic Information

Item Value
gene id G625199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 55434654 ~ 55434950 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU710944
CTAACACACAGAACCAGGTCATTAGCTGCAGAGGGGCTGAAATTGGgagcctttatctctctctgtaagCACTCTACCATCCACATGTTGACTTTGTGGCAATGTCATGATCTGTGtgatctttttatttatttatccgttattttaccaggtaagttgtctgagaacacattctcatttgcagcaacgacctggggaatagttacaggggagaggagggggatgaatgagccaattgtctGTCCGTGCGTCCGTCTGCAGCTTACTTACCTTCTATAATGTGTTTTCGGGACAagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU710944 True 297 lncRNA 0.45 1 55434654 55434950

Neighbor

gene id symbol gene type direction distance location
LOC110528970 LOC106582957 coding upstream 18575 55333097 ~ 55416079 (+)
LOC110528019 LOC106582960 coding upstream 118751 55313448 ~ 55315903 (+)
LOC110527126 LOC106582962 coding upstream 225946 55207615 ~ 55208708 (+)
LOC110528013 LOC106582964 coding upstream 235586 55197770 ~ 55199068 (+)
LOC110528014 NA coding upstream 239592 55193493 ~ 55195062 (+)
LOC110528022 LOC106583050 coding downstream 70456 55505406 ~ 55508166 (+)
LOC110528024 LOC106583050 coding downstream 276685 55711635 ~ 55714713 (+)
LOC110528971 LOC106583048 coding downstream 357341 55792291 ~ 55798284 (+)
foxp4 LOC106583051 coding downstream 672717 56107667 ~ 56295859 (+)
mdfi LOC106583052 coding downstream 940249 56375199 ~ 56376062 (+)
G625198 NA non-coding upstream 902 55433458 ~ 55433752 (+)
G625196 NA non-coding upstream 3713 55430617 ~ 55430941 (+)
G625170 NA non-coding upstream 75614 55358474 ~ 55359040 (+)
G625139 NA non-coding upstream 131467 55302334 ~ 55303187 (+)
G625089 NA non-coding upstream 199040 55235355 ~ 55235614 (+)
G625202 NA non-coding downstream 1641 55436591 ~ 55436817 (+)
G625205 NA non-coding downstream 7110 55442060 ~ 55442261 (+)
G625208 NA non-coding downstream 11726 55446676 ~ 55447327 (+)
G625224 NA non-coding downstream 39050 55474000 ~ 55474218 (+)
G625225 NA non-coding downstream 40090 55475040 ~ 55475310 (+)
G625038 NA other upstream 220743 55211705 ~ 55213911 (+)
LOC110528007 LOC106582974 other upstream 362267 55053185 ~ 55074095 (+)
G624962 LOC106582975 other upstream 381966 55047296 ~ 55052688 (+)
G624628 NA other upstream 610455 54823637 ~ 54824199 (+)
G625222 NA other downstream 37518 55472468 ~ 55472843 (+)
G626004 NA other downstream 636104 56071054 ~ 56078929 (+)
G626417 NA other downstream 1047444 56482394 ~ 56485304 (+)
snrpe ruxe other downstream 1884752 57319669 ~ 57323047 (+)

Expression


Co-expression Network