G625225


Basic Information

Item Value
gene id G625225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 55475040 ~ 55475310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU710970
cctacatgaataatcattttatttttttattttaaagcattgtaaactttttttttggtccagtggatggtcggtctgtggccatgactgtctgtgagtggttgcatttctccacccttatcctTTGACtgcttacaggaacaatggtgaggtgtttgctctgtccctgtactatagattgccctttaacctctgtagccttctgcctggtgtgtttaacttgtctaaagtatggtatctttaaagttatttttttatttgtatttttatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU710970 True 271 lncRNA 0.36 1 55475040 55475310

Neighbor

gene id symbol gene type direction distance location
LOC110528970 LOC106582957 coding upstream 58961 55333097 ~ 55416079 (+)
LOC110528019 LOC106582960 coding upstream 159137 55313448 ~ 55315903 (+)
LOC110527126 LOC106582962 coding upstream 266332 55207615 ~ 55208708 (+)
LOC110528013 LOC106582964 coding upstream 275972 55197770 ~ 55199068 (+)
LOC110528014 NA coding upstream 279978 55193493 ~ 55195062 (+)
LOC110528022 LOC106583050 coding downstream 30096 55505406 ~ 55508166 (+)
LOC110528024 LOC106583050 coding downstream 236325 55711635 ~ 55714713 (+)
LOC110528971 LOC106583048 coding downstream 316981 55792291 ~ 55798284 (+)
foxp4 LOC106583051 coding downstream 632357 56107667 ~ 56295859 (+)
mdfi LOC106583052 coding downstream 899889 56375199 ~ 56376062 (+)
G625224 NA non-coding upstream 822 55474000 ~ 55474218 (+)
G625208 NA non-coding upstream 27713 55446676 ~ 55447327 (+)
G625205 NA non-coding upstream 32779 55442060 ~ 55442261 (+)
G625202 NA non-coding upstream 38223 55436591 ~ 55436817 (+)
G625199 NA non-coding upstream 40090 55434654 ~ 55434950 (+)
G625256 NA non-coding downstream 50162 55525472 ~ 55528088 (+)
G625244 dj-1 non-coding downstream 91672 55566982 ~ 55571742 (+)
G625302 pax7b non-coding downstream 150309 55625619 ~ 55626641 (+)
G625328 NA non-coding downstream 199741 55675051 ~ 55729221 (+)
G625392 NA non-coding downstream 314992 55790302 ~ 55790523 (+)
G625222 NA other upstream 2197 55472468 ~ 55472843 (+)
G625038 NA other upstream 261129 55211705 ~ 55213911 (+)
LOC110528007 LOC106582974 other upstream 402653 55053185 ~ 55074095 (+)
G624962 LOC106582975 other upstream 422352 55047296 ~ 55052688 (+)
G626004 NA other downstream 595744 56071054 ~ 56078929 (+)
G626417 NA other downstream 1007084 56482394 ~ 56485304 (+)
snrpe ruxe other downstream 1844392 57319669 ~ 57323047 (+)
G627035 NA other downstream 2067572 57542882 ~ 57596051 (+)

Expression


Co-expression Network