XLOC_025453 (mylk5)


Basic Information

Item Value
gene id XLOC_025453
gene name mylk5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 31662126 ~ 31699298 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050189
GTGAGAGTGGAGAGGACTGAGCCCTGCCTGTACACCCCAATGAATGAGTGATGAGGAGGAGCCAAAACCTGAGAGATGCAGAGCAAAGACATGTGTGCGCGACGGAGACTCTGAGACACAGGAAAACACAAGCCATCAGAGAACAACGCAGGGAAATGACTGGGATTTTATGAAGCGGGTGTAAAACTGAAAGAAGAAATGAGCACTGCTGATGGAAAGACACGCTTTGTGTCCACTTTAAGGATACAATTGTCTGGCTTCCAGCCAAATGGACAGGGGTCTCGACCAGTCATAAAAAAGCCTGAAGACACATCAAGTGCAGTGAATGGCAATTACAACCACACAAGGCAACTGGATCCACCTCTTTTCACCAAGCCCCTCGAGGACTGTATAGTAGATGAAGGAAATGACATCACATTGAACGGAAGTATCACTGGGAGCCAGCCAATCAGCATTTCCTGGCTTCATAATGGCGAGACTGTACGATTTGGTAAATCTTCATTAGTGGGAGAAAAAGTGACTTTGGTAGTGAGGGAATGTCTGCCAGAAGATGCTGGGGCTTATACCTGCATGGCTGAAAACATAGCCGGAAAAACATCCAGCAGTGCAGCAGTTTGTGTAAGAGACTATGAATCAATTGTTAGAGTCAACAACAATATCATCAACAAATCCCACGCTCATCCTCACACTCCTGACCTGCTGAACGGGACATCAGAGGACACAAGTGTTTGTAAAGGCCCAGAGTCTCCTCAGACAGGAAGTCCTGTTACAAACTCTCCAGTACTCAAAAGAGAAGTGCATGTCAAGCGGAGGAGCAGCTCAGGTGCAGGTTTTACAGCACCTCCTCTGCAGTTTGTGGATCCATTAGACCGGTTGGAGGTGCAAGTCGGAGAAACAGCCCGTCTAGAGTGTTTCTTCAAAGGCAGCTCACCTGTAGCATCTTGCTGGGTCTTTAACAAAAAAGAGGTGGAGGAAAGCTCCAGGTTTCATCTCGAGTCCTGTGATGAAAACAGTTCTCTGGTCATTTCTGAAGCTCTTCCTGAAGACTCTGGGCGTTACACAATATTTGTACGAGATCGCAAAAGTTCCGCCCAACACACAGTGACACTGAATGTCATTGACCTGCCTCAGCCGCCTGCTTCTTGTCCAGTGGCGCGTGTTCTGTCCCCTCACTCTCTGGTTCTTTCCTGGTCTGGACCATCGTATGATGGTGGCAGCGCTGTGACGGGATACGTGGTGGAGGTTTGTGAAAAAGAGTCTGAACAGTGGAAAGAGCTCACAGCGCAGTGTAAGAGCACCTCTCTCAGGGTGACCTCTGGCCTCCAGCCTCAGGGTCAATACTGCTTCCGCATCAGAGCCTGTAACACTGTGGGGGTCAGCGAACCCAGCCAAGAGTCCCAGACAGTCACGATGGACAACCCAGGAGATTCCCGTGAAGAGAAGCCAGTGGAGTATGTGAATGTGACCATCGACACTCAACATAAACTCACTGACCACTATAACGTGCTGGAGAAACTAGGAGTAGGGAAGTTTGGCCAAGTGTTTCGGATGACCCATAAGGTGACGGGTCGCGAATGTGCTGGAAAGTTCTATAAGAGTCGTCGGGCAAAGGACAGAGAGGCTGCGAGGAAAGAAATAGAGCTGATGAACTTCTTACACCATCCTAAACTGGTGCAGTGTCTCGCTGCATATGACAACAAAGCCGAGATGGTCATGGTGATGGAGTATGTTGCTGGTGGTGAGCTGTTTGAGCGGATTGTCGATGACAGTTTTGAGCACACAGAGGTGTCCAGTGTGGGCTACATGCGTCAGATTCTAGAGGGCATTAAGTACATGCACCAGCAAAACATCCTCCATCTGGATCTCAAACCTGAGAATATCGTCTGTGTGGACAGAACCGGGAGTCAGATCAAAATCATTGACTTCGGACTCGCTTGCAAACTAGATCCTAACACGCCTCTCAAGGTGATGCAGGGCACGCCAGAGTTTGTGGCCCCGGAGGTCATCAACTTTGAGGCCGTCACTCTGACCACCGATATGTGGAGCGTCGGGGTGATCTGCTACATCCTGTTGAGCGGCGAGTCTCCGTTTCAGGGCGAGAGCGACACCGAGACGTTGGCTTTGGTGACCGCGGCGCAGTGGGAGTTTGATGAGGAGAGTTTTGAGGAGATCACTGATATGGCAAAAGGCTTCATCAGCTCCCTGCTCAATAAAGATCCCAGGCGCAGATTGTCCTGTGAAGAGGCTTTGGCTCATGACTGGCTGGGTTTTTTGTGCGTGGACAACAGCAGCAGCGGCGGCAAAAACCTCTCCAAAGACAAGATGAAGAAGTTCCTGACCAGGCAGAAGTGGAAGAAAACAGGAAAAGCCTTGCTGGCTCTGAAGAGGATGGCCATCTTGTCTAAACCAGAAGCTTCTGCAAGCACGAGCCCTGTCCATGAGACAGAACAGGCACTGCAGTCTCTGGAGCTGAAGCTTCAATGTAAACCTGAGTTCAGTAAGACTCCATCTGACCTGAGCGTCCCGCAGGGCTCCAGCGTCCATCTCTCCTGCCTCATCACAGGTTACCCTGACCCTGAGGTGGTGTGGTTGAGGGACGGAGAGCTGCTGGAGCTGCAGGGCGGCTCTGTGACAGTGGACTATGAGGAGGACGGCAGCTGTACTCTCATCCTAAACAATGTGTCTTTGAATCACAGCGGCCTGTATTCCTGTAAAGCCACTAATGCACTCGGGGAGGCGCTGTGCTCTGCTACACTTACTGTAGTGTAGAAAAACACACATGACTTCATAGTAGCACACAGGTTACGCTGAAATGAGCAGAGTAGAGAGATTGAAATATATTGTTGTAATCAATGCCAGAATAATTGTCAATTCAGtgttaaaactgtaataaaataaaggCTGATTGATTTTATTGCTATTTACATTAATCACAGATAAATTCAATTGTCATTTTAGATTGTGTTTTGGTTCTCTTTGGTTCAGAGCAACTCATAGTTAGCCCTAGTTCTGTAACGATATAGATAACAGAACTGTTTGTGCAGCATGTTTTAGAACTTATCAAATATCCAGAACAATTCTGTGTGCTGGACTTAACAATTTCTTGCTTGTccataaaatatgatatttttattaaataataattcatgAAGA
>TCONS_00050190
AGGAAAACACAAGCCATCAGAGAACAACGCAGGGAAATGACTGGGATTTTATGAAGCGGGTGTAAAACTGAAAGAAGAAATGAGCACTGCTGATGGAAAGACACGCTTTGTGTCCACTTTAAGGATACAATTGTCTGGCTTCCAGCCAAATGGACAGGGGTCTCGACCAGTCATAAAAAAGCCTGAAGACACATCAAGTGCAGGCAATGAATGGCAATTACAACCACACAAGGCAACTGGATCCACCTCTTTTCACCAAGCCCCTCGAGGACTGTATAGTAGATGAAGGAAATGACATCACATTGAACGGAAGTATCACTGGGAGCCAGCCAATCAGCATTTCCTGGCTTCATAATGGTGAGCCCTGTtgttattacttttaaaaatgttcataatacTTATTTTGCTAA
>TCONS_00050191
GACCTCTGGCCTCCAGCCTCAGGGTCAATACTGCTTCCGCATCAGAGCCTGTAACACTGTGGGGGTCAGCGAACCCAGCCAAGAGTCCCAGACAGTCACGATGGACAACCCAGATTCCCGTGAAGAGAAGCCAGTGGAGTATGTGAATGTGACCATCGACACTCAACATAAACTCACTGACCACTATAACGTGCTGGAGAAACTAGGAGTAGGGAAGTTTGGCCAAGTGTTTCGGATGACCCATAAGGTGACGGGTCGCGAATGTGCT

Function

symbol description
mylk5 Predicted to enable myosin light chain kinase activity. Predicted to act upstream of or within protein phosphorylation. Is expressed in eye.

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0005575 cellular_component cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0004687 myosin light chain kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050309-74 Predicted to enable myosin light chain kinase activity. Predicted to act upstream of or within protein phosphorylation. Is expressed in eye.

Ensembl:

ensembl_id ENSDARG00000075164

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050189 False 3153 mRNA 0.48 17 31662126 31699298
TCONS_00050190 False 410 lncRNA 0.43 2 31662245 31668846
TCONS_00050191 True 268 mRNA 0.53 3 31680592 31686858

Neighbor

gene id symbol gene type direction distance location
XLOC_025452 fzd2 coding upstream 37913 31621774 ~ 31624213 (+)
XLOC_025451 ccdc43 coding upstream 56795 31600593 ~ 31605331 (+)
XLOC_025450 c1ql3b coding upstream 231637 31396149 ~ 31430489 (+)
XLOC_025449 NA coding upstream 422563 31231809 ~ 31239563 (+)
XLOC_025448 clec19a coding upstream 473995 31177972 ~ 31188131 (+)
XLOC_025454 dcaf7 coding downstream 17963 31717261 ~ 31726949 (+)
XLOC_025455 BX324157.1 coding downstream 89223 31788521 ~ 31788637 (+)
XLOC_025456 BX324157.2 coding downstream 151706 31851004 ~ 31870003 (+)
XLOC_025457 strada coding downstream 197731 31897029 ~ 31917390 (+)
XLOC_025458 NA coding downstream 218864 31918162 ~ 31919131 (+)
XLOC_025429 BX649540.1 misc upstream 1413090 30248739 ~ 30249036 (+)
XLOC_025447 NA non-coding upstream 491252 31169219 ~ 31170874 (+)
XLOC_025446 NA non-coding upstream 556473 31097933 ~ 31105653 (+)
XLOC_025439 NA non-coding upstream 713672 30943288 ~ 30948454 (+)
XLOC_025437 NA non-coding upstream 754000 30907892 ~ 30908126 (+)
XLOC_025473 NA non-coding downstream 594475 32293773 ~ 32297003 (+)
XLOC_025475 NA non-coding downstream 646836 32346134 ~ 32347493 (+)
XLOC_025481 CR936975.1 non-coding downstream 775363 32474661 ~ 32477285 (+)

Expression


Co-expression Network