G625847


Basic Information

Item Value
gene id G625847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 55844868 ~ 55845248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU711670
ctgtgtggttacatggttaatctgtgagttacagggttaattctgtgtggttacaggattaattctgtgtggttacaggatTAATTTTGTGTGGTTACAGgattaattctgtgtggttacagagttaattttgtgtggttacatggttaattctgtgtggttacaggattaattctgtgtggttacagggttaattctgtgtggttacatggttaattctgtgtggttacagggttaattttgtgtggttacagggttaattctgtgtggttacagggttaattctgtgtggttacagggttaattctgtgtggttacaggattaattctgtgtggttacagggttaattctgtgtggttacagggttaattctgtgtggt

Function

NR:

description
proline-rich protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU711670 True 381 lncRNA 0.38 1 55844868 55845248

Neighbor

gene id symbol gene type direction distance location
LOC110528971 LOC106583048 coding upstream 46584 55792291 ~ 55798284 (+)
LOC110528024 LOC106583050 coding upstream 130155 55711635 ~ 55714713 (+)
LOC110528022 LOC106583050 coding upstream 336702 55505406 ~ 55508166 (+)
LOC110528970 LOC106582957 coding upstream 428789 55333097 ~ 55416079 (+)
LOC110528019 LOC106582960 coding upstream 528965 55313448 ~ 55315903 (+)
foxp4 LOC106583051 coding downstream 262419 56107667 ~ 56295859 (+)
mdfi LOC106583052 coding downstream 529951 56375199 ~ 56376062 (+)
ppfia4 LOC106583137 coding downstream 760644 56605892 ~ 56716813 (+)
LOC110528029 mdm4 coding downstream 905556 56750804 ~ 56766586 (+)
LOC110528032 LOC106583134 coding downstream 972033 56817281 ~ 56842143 (+)
G625846 NA non-coding upstream 1976 55842374 ~ 55842892 (+)
G625394 NA non-coding upstream 46187 55798441 ~ 55798681 (+)
G625392 NA non-coding upstream 54345 55790302 ~ 55790523 (+)
G625328 NA non-coding upstream 115647 55675051 ~ 55729221 (+)
G625302 pax7b non-coding upstream 218227 55625619 ~ 55626641 (+)
G625863 NA non-coding downstream 24901 55870149 ~ 55872520 (+)
G625866 NA non-coding downstream 29926 55875174 ~ 55875523 (+)
G625870 NA non-coding downstream 34255 55879503 ~ 55879761 (+)
G625878 NA non-coding downstream 42603 55887851 ~ 55888078 (+)
G625885 NA non-coding downstream 47681 55892929 ~ 55893151 (+)
G625222 NA other upstream 372025 55472468 ~ 55472843 (+)
G625038 NA other upstream 630957 55211705 ~ 55213911 (+)
LOC110527126 LOC106582962 other upstream 636605 55207615 ~ 55208708 (+)
LOC110528007 LOC106582974 other upstream 772481 55053185 ~ 55074095 (+)
G626004 NA other downstream 225806 56071054 ~ 56078929 (+)
G626417 NA other downstream 637146 56482394 ~ 56485304 (+)
snrpe ruxe other downstream 1474454 57319669 ~ 57323047 (+)
G627035 NA other downstream 1697634 57542882 ~ 57596051 (+)
LOC110528055 LOC106583107 other downstream 2072786 57917801 ~ 58055214 (+)

Expression


Co-expression Network