Gene
RNA
| Item | Value |
|---|---|
| gene id | G625964 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 56002666 ~ 56004143 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU711789 | True | 326 | lncRNA | 0.42 | 2 | 56002666 | 56004143 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528971 | LOC106583048 | coding | upstream | 204382 | 55792291 ~ 55798284 (+) |
| LOC110528024 | LOC106583050 | coding | upstream | 287953 | 55711635 ~ 55714713 (+) |
| LOC110528022 | LOC106583050 | coding | upstream | 494500 | 55505406 ~ 55508166 (+) |
| LOC110528970 | LOC106582957 | coding | upstream | 586587 | 55333097 ~ 55416079 (+) |
| LOC110528019 | LOC106582960 | coding | upstream | 686763 | 55313448 ~ 55315903 (+) |
| foxp4 | LOC106583051 | coding | downstream | 103524 | 56107667 ~ 56295859 (+) |
| mdfi | LOC106583052 | coding | downstream | 371056 | 56375199 ~ 56376062 (+) |
| ppfia4 | LOC106583137 | coding | downstream | 601749 | 56605892 ~ 56716813 (+) |
| LOC110528029 | mdm4 | coding | downstream | 746661 | 56750804 ~ 56766586 (+) |
| LOC110528032 | LOC106583134 | coding | downstream | 813138 | 56817281 ~ 56842143 (+) |
| G625960 | NA | non-coding | upstream | 7479 | 55992773 ~ 55995187 (+) |
| G625886 | NA | non-coding | upstream | 109065 | 55893270 ~ 55893601 (+) |
| G625885 | NA | non-coding | upstream | 109515 | 55892929 ~ 55893151 (+) |
| G625878 | NA | non-coding | upstream | 114588 | 55887851 ~ 55888078 (+) |
| G625870 | NA | non-coding | upstream | 122905 | 55879503 ~ 55879761 (+) |
| G625968 | NA | non-coding | downstream | 4036 | 56008179 ~ 56011041 (+) |
| G626033 | NA | non-coding | downstream | 143895 | 56148038 ~ 56148362 (+) |
| G626096 | NA | non-coding | downstream | 258010 | 56262153 ~ 56262632 (+) |
| G626300 | NA | non-coding | downstream | 305594 | 56309737 ~ 56309999 (+) |
| G626310 | NA | non-coding | downstream | 319597 | 56323740 ~ 56323941 (+) |
| G625222 | NA | other | upstream | 529823 | 55472468 ~ 55472843 (+) |
| G625038 | NA | other | upstream | 788755 | 55211705 ~ 55213911 (+) |
| LOC110527126 | LOC106582962 | other | upstream | 794403 | 55207615 ~ 55208708 (+) |
| LOC110528007 | LOC106582974 | other | upstream | 930279 | 55053185 ~ 55074095 (+) |
| G626004 | NA | other | downstream | 66911 | 56071054 ~ 56078929 (+) |
| G626417 | NA | other | downstream | 478251 | 56482394 ~ 56485304 (+) |
| snrpe | ruxe | other | downstream | 1315559 | 57319669 ~ 57323047 (+) |
| G627035 | NA | other | downstream | 1538739 | 57542882 ~ 57596051 (+) |
| LOC110528055 | LOC106583107 | other | downstream | 1913891 | 57917801 ~ 58055214 (+) |
