XLOC_025455 (BX324157.1)



Basic Information


Item Value
gene id XLOC_025455
gene name BX324157.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 31788521 ~ 31788637 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00050194
ACTAACACCCATATTACTCTGCAGCCAAAGATTggtcactcactgaagctaagcaggactgagtctggtcagtaccttaatgggagaccacatggtaaaataaggttgctgttggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113428

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00050194 True 117 rRNA 0.44 1 31788521 31788637

Neighbor


gene id symbol gene type direction distance location
XLOC_025454 dcaf7 coding upstream 61572 31717261 ~ 31726949 (+)
XLOC_025453 mylk5 coding upstream 89223 31662126 ~ 31699298 (+)
XLOC_025452 fzd2 coding upstream 164308 31621774 ~ 31624213 (+)
XLOC_025451 ccdc43 coding upstream 183190 31600593 ~ 31605331 (+)
XLOC_025450 c1ql3b coding upstream 358032 31396149 ~ 31430489 (+)
XLOC_025456 BX324157.2 coding downstream 62367 31851004 ~ 31870003 (+)
XLOC_025457 strada coding downstream 108392 31897029 ~ 31917390 (+)
XLOC_025458 NA coding downstream 129525 31918162 ~ 31919131 (+)
XLOC_025459 snrnp70 coding downstream 136430 31925067 ~ 31933774 (+)
XLOC_025460 lin7b coding downstream 145256 31933893 ~ 31944709 (+)
XLOC_025429 BX649540.1 misc upstream 1539485 30248739 ~ 30249036 (+)
XLOC_025449 NA non-coding upstream 548958 31231809 ~ 31239563 (+)
XLOC_025447 NA non-coding upstream 617647 31169219 ~ 31170874 (+)
XLOC_025446 NA non-coding upstream 682868 31097933 ~ 31105653 (+)
XLOC_025439 NA non-coding upstream 840067 30943288 ~ 30948454 (+)
XLOC_025437 NA non-coding upstream 880395 30907892 ~ 30908126 (+)
XLOC_025473 NA non-coding downstream 505136 32293773 ~ 32297003 (+)
XLOC_025475 NA non-coding downstream 557497 32346134 ~ 32347493 (+)
XLOC_025481 CR936975.1 non-coding downstream 686024 32474661 ~ 32477285 (+)
XLOC_025487 FP236454.1 non-coding downstream 782672 32571309 ~ 32571371 (+)

Expression



Co-expression Network