Gene
RNA
| Item | Value |
|---|---|
| gene id | G626294 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 56306653 ~ 56306858 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU712153 | True | 206 | lncRNA | 0.53 | 1 | 56306653 | 56306858 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528023 | errfi | coding | downstream | 571632 | 55727429 ~ 55735021 (-) |
| pax7b | pax7b | coding | downstream | 607345 | 55620553 ~ 55699308 (-) |
| LOC118965301 | NA | coding | downstream | 656781 | 55644983 ~ 55649872 (-) |
| LOC110528021 | dj-1 | coding | downstream | 734926 | 55567122 ~ 55571727 (-) |
| LOC110528020 | LOC106582955 | coding | downstream | 739665 | 55420466 ~ 55566988 (-) |
| tfeb | LOC106583139 | coding | upstream | 175515 | 56482373 ~ 56593011 (-) |
| tmem183a | tmem183a | coding | upstream | 292385 | 56599243 ~ 56604594 (-) |
| myog | tmyogenin | coding | upstream | 410018 | 56716876 ~ 56720187 (-) |
| mdm4 | mdm4 | coding | upstream | 450208 | 56757066 ~ 56772426 (-) |
| sort1a | LOC106583135 | coding | upstream | 465957 | 56772815 ~ 56796604 (-) |
| G626285 | NA | non-coding | downstream | 10808 | 56289480 ~ 56295845 (-) |
| G626213 | NA | non-coding | downstream | 164052 | 56134512 ~ 56142601 (-) |
| G625884 | NA | non-coding | downstream | 413908 | 55892467 ~ 55892745 (-) |
| G625865 | NA | non-coding | downstream | 434137 | 55870757 ~ 55872516 (-) |
| G625862 | NA | non-coding | downstream | 437462 | 55868938 ~ 55869191 (-) |
| G626299 | NA | non-coding | upstream | 2439 | 56309297 ~ 56309592 (-) |
| G626367 | NA | non-coding | upstream | 79317 | 56386175 ~ 56386471 (-) |
| G626369 | NA | non-coding | upstream | 80576 | 56387434 ~ 56387655 (-) |
| G626379 | NA | non-coding | upstream | 87489 | 56394347 ~ 56394571 (-) |
| G626384 | NA | non-coding | upstream | 92245 | 56399103 ~ 56399314 (-) |
| G625472 | LOC106582968 | other | downstream | 1134453 | 55164492 ~ 55188756 (-) |
| G625426 | NA | other | downstream | 1231257 | 55072479 ~ 55075396 (-) |
| G622985 | NA | other | downstream | 2983822 | 53305536 ~ 53322831 (-) |
| G619733 | NA | other | downstream | 5348113 | 50956271 ~ 50958540 (-) |
| G627254 | NA | other | upstream | 384465 | 56691323 ~ 56696091 (-) |
| G627314 | NA | other | upstream | 527727 | 56834350 ~ 56835092 (-) |
| G627323 | NA | other | upstream | 540104 | 56846962 ~ 56852301 (-) |
| vamp3 | vamp3 | other | upstream | 546709 | 56853567 ~ 56869607 (-) |
| LOC110528040 | NA | other | upstream | 745333 | 57052191 ~ 57059527 (-) |
