G627254


Basic Information

Item Value
gene id G627254
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 56691323 ~ 56696091 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU713244
GTGTTAGGCAAGGTCTATTTAAATCATtccaggagctgccagtctgtcgGTAGGTATTAATCTAAGGGTTAGGAAGGAGGTAAGGGCTGTGGTGAGGGGAAGCGTGTGTGGCTGGGTGGGGGTTAGACTACAGTGAGTTGACAGgtctctggggcagtgtgtcgCTGTGAAGTAGGGGAATCtggacaaatctctctctctctctcactctctggggCAGTGTGGCGCTGTGAAGTAGGGGAATCtggacaaatctctctctctctctctctctggggcagtGTGGTGCTGTGAAGTAGGGGAATCtggacaaatctctctctctctctggggcagtgtgtcgCTGTGAAGTAGGGGAATCtgcacaaatctctctctctctctctctttctctggggcAGTGTGGCGCTGTCAAGTAGGGGAATCTGgacaaatctctctctttctctggggcAGTGTGGCGCTGTGAAGTAGGGGAATCtggacaaatctctctctctctctggggcagtGTGGCGCTGTGAAGTAGGGGAATCTGGacaaatctctctctttcactctctggggcagtgtgtcgCTGTGAAGTAGGGGAATCtggacaaatctctctctctctctctctctctctgtctggggcagtGTGGCACTGTGAAGTAGGGGAATCtggacaaatctctctctctctctggggcagtGTGGCACTGAGAATTAGGGGAATCtggacaaatctctctctctctcacactctggaGCAGTGTGGTGCTGTGAAGTAGGGGAATCtggacaaatctctctctctctctggggcagtGTGGCACTGAGAATTAGGGGAATCtggacaaatctctctctctctcacactctctggaGCAGTGTGGTGCTGTGAAGTAGGGGAATCtggacaaatctctctctctctctggggcagtGTGGCGCTGTGAAGTAGGGGAATCTGGACAAATCTCTCCCTGGGGCAGTGTGGCGCTGTGAAGTAGGGGAATCtggacaaatctctctctctggagcagtGTCGTGCTGTGAAGTAGAGGAATCTGGacaaatctctctctgtctctctcgctcttattATGATTATAAAGCTTTATAACATAACCCATACATCCCAGGTAAACTTCCAACCATGTTTCTAATGCTCAATAAATCCTCTGTCCAGAGTATTAGGTCATCTGACCCTCTTGTGGGATTTCTGACCAGGCACAAACTGTCCTCCATGTTTAATTACATAAAGCTTCATTATTCCCCATGGACAGAAACAGACATTGTTACATAACACGTGCTCATTTCAGAGAATAAtactaggagagggagagaagacggggCTCTTTGGTAATACAGTAGGGCTCAACTGCATTGCAATCATCACAATGGCAAAAGAGCTTTAAACCACAGAGTAGATTCTGCATTTAGCCTAACTCAtcagcagtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagcgagagaaagacagatagacatatcgatagacagagaaagagagaggagggagacagatagacagagagaggagggagacagacaaacagacagaggagggagacagacaaacagacagagagaggagggagacagacaagcagacagagagaggagggagacagacaaacagaaagagagaggagggagacagacaaacagacagagagaggagggagacagacctacagacagagagaggagacagacacacagacatagagaggagggggacagacaaacagacagagaaatgagggagacagacagacagaaagagagaggagggagacagacaaacagagagaggagggagacagacacacagacagagagaggagggagacagacaaacagaaagagagaggagggagacagacaaacagacagagagaggagggagacagacaaacagaaagagagaggagggagacagacagacagagagaggagggagacagacaaacagacagagagaggagagagacagacaaacagacagagagaggagggagacagacctacagacagagagaggagggagacaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU713244 True 2109 TUCP 0.50 2 56691323 56696091

Neighbor

gene id symbol gene type direction distance location
tmem183a tmem183a coding downstream 86729 56599243 ~ 56604594 (-)
tfeb LOC106583139 coding downstream 98312 56482373 ~ 56593011 (-)
LOC110528023 errfi coding downstream 956302 55727429 ~ 55735021 (-)
pax7b pax7b coding downstream 992015 55620553 ~ 55699308 (-)
LOC118965301 NA coding downstream 1041451 55644983 ~ 55649872 (-)
myog tmyogenin coding upstream 20785 56716876 ~ 56720187 (-)
mdm4 mdm4 coding upstream 60975 56757066 ~ 56772426 (-)
sort1a LOC106583135 coding upstream 76724 56772815 ~ 56796604 (-)
psma5 psma5 coding upstream 100757 56796848 ~ 56806013 (-)
vamp3 vamp3 coding upstream 157720 56853567 ~ 56869607 (-)
G627175 NA non-coding downstream 194691 56495308 ~ 56496632 (-)
G627172 NA non-coding downstream 199367 56491664 ~ 56491956 (-)
G626402 NA non-coding downstream 264364 56426750 ~ 56426959 (-)
G626384 NA non-coding downstream 292009 56399103 ~ 56399314 (-)
G627281 NA non-coding upstream 52634 56748725 ~ 56750461 (-)
G627295 NA non-coding upstream 118506 56814597 ~ 56814801 (-)
G627300 NA non-coding upstream 121211 56817302 ~ 56817561 (-)
G627305 LOC106583134 non-coding upstream 127029 56823120 ~ 56823415 (-)
G627306 NA non-coding upstream 128634 56824725 ~ 56825042 (-)
LOC110528020 LOC106582955 other downstream 1257251 55420466 ~ 55566988 (-)
G625472 LOC106582968 other downstream 1519123 55164492 ~ 55188756 (-)
G625426 NA other downstream 1615927 55072479 ~ 55075396 (-)
G622985 NA other downstream 3368492 53305536 ~ 53322831 (-)
G619733 NA other downstream 5732783 50956271 ~ 50958540 (-)
G627314 NA other upstream 138494 56834350 ~ 56835092 (-)
G627323 NA other upstream 150871 56846962 ~ 56852301 (-)
LOC110528040 NA other upstream 356100 57052191 ~ 57059527 (-)
G628575 LOC106579815 other upstream 1175959 57872050 ~ 57873331 (-)

Expression


Co-expression Network