G627281


Basic Information

Item Value
gene id G627281
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 56748725 ~ 56750461 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU713274
GAATAGTCTACCTTATAGGTGCTAAACTCAGTAGCGTTCACACTATGATAATAATATTCATTTGAACTGTAAAGCACTTTCGTTTATTACACTCAAATGGCTTTTATGAGGAGTCATGCATGCTCTCCAAGGACCTCTGTCAGATCATCTTTCAGAATGGTCATTGGAAGCGGGTTGGTGAACCGGGTATGTTTTATAGCAAACCTCTCGGCTTGTTTGTGAGGGTGTATATGTCCTGTGTATTTGTGACAGTGTGTGGGGTATGTTGGCAGTAAGTAGGgaaagtgttgtgtgtgtgattaagttaggtctgtgtagtgttgtttgtgtgattaagttagggctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtagtgttgtgtgtgtgattaagttaggtctgtgtacagtgtgtgtgattaagttaggtctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtacagtgttgtgtgtgtgataaagttaggtctgtgtacagtgttgtgtgtgtgattaagttagggctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtacagtgtgtgtgattaagttaggtctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtacagtgtgtgtgataaagttaggtctgtgtacagtgttgtgtgtgtgattaagttagggctgtgtacagtgtgtgtgataaagttaggtctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtacagtgtgtgtgattaagttaggtctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtacagtgtgtgtgattaagttaggtctgtgtacattgttgtgtgtgtgattaagttagggctgtgtacagtgttgtgtgtgtgattaagttaggtctgtgtacagtgtgtgtgattaagttaggtctgtgtacagtgttgtgtgtgtgattaagttagggctgtgtacagtgttgtgtgtgtgataaagTTAGGGCTgtttacagtgttgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU713274 True 1169 lncRNA 0.41 2 56748725 56750461

Neighbor

gene id symbol gene type direction distance location
myog tmyogenin coding downstream 28538 56716876 ~ 56720187 (-)
tmem183a tmem183a coding downstream 144131 56599243 ~ 56604594 (-)
tfeb LOC106583139 coding downstream 155714 56482373 ~ 56593011 (-)
LOC110528023 errfi coding downstream 1013704 55727429 ~ 55735021 (-)
pax7b pax7b coding downstream 1049417 55620553 ~ 55699308 (-)
mdm4 mdm4 coding upstream 6605 56757066 ~ 56772426 (-)
sort1a LOC106583135 coding upstream 22354 56772815 ~ 56796604 (-)
psma5 psma5 coding upstream 46387 56796848 ~ 56806013 (-)
vamp3 vamp3 coding upstream 103350 56853567 ~ 56869607 (-)
LOC110528035 LOC106583131 coding upstream 130870 56881331 ~ 57017276 (-)
G627175 NA non-coding downstream 252093 56495308 ~ 56496632 (-)
G627172 NA non-coding downstream 256769 56491664 ~ 56491956 (-)
G626402 NA non-coding downstream 321766 56426750 ~ 56426959 (-)
G626384 NA non-coding downstream 349411 56399103 ~ 56399314 (-)
G627295 NA non-coding upstream 64136 56814597 ~ 56814801 (-)
G627300 NA non-coding upstream 66841 56817302 ~ 56817561 (-)
G627305 LOC106583134 non-coding upstream 72659 56823120 ~ 56823415 (-)
G627306 NA non-coding upstream 74264 56824725 ~ 56825042 (-)
G627307 NA non-coding upstream 75574 56826035 ~ 56826313 (-)
G627254 NA other downstream 52634 56691323 ~ 56696091 (-)
LOC110528020 LOC106582955 other downstream 1314653 55420466 ~ 55566988 (-)
G625472 LOC106582968 other downstream 1576525 55164492 ~ 55188756 (-)
G625426 NA other downstream 1673329 55072479 ~ 55075396 (-)
G622985 NA other downstream 3425894 53305536 ~ 53322831 (-)
G627314 NA other upstream 84124 56834350 ~ 56835092 (-)
G627323 NA other upstream 96501 56846962 ~ 56852301 (-)
LOC110528040 NA other upstream 301730 57052191 ~ 57059527 (-)
G628575 LOC106579815 other upstream 1121589 57872050 ~ 57873331 (-)

Expression


Co-expression Network