Gene
RNA
| Item | Value |
|---|---|
| gene id | G627300 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 56817302 ~ 56817561 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU713295 | True | 260 | lncRNA | 0.48 | 1 | 56817302 | 56817561 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psma5 | psma5 | coding | downstream | 11289 | 56796848 ~ 56806013 (-) |
| sort1a | LOC106583135 | coding | downstream | 20698 | 56772815 ~ 56796604 (-) |
| mdm4 | mdm4 | coding | downstream | 44876 | 56757066 ~ 56772426 (-) |
| myog | tmyogenin | coding | downstream | 97115 | 56716876 ~ 56720187 (-) |
| tmem183a | tmem183a | coding | downstream | 212708 | 56599243 ~ 56604594 (-) |
| vamp3 | vamp3 | coding | upstream | 36250 | 56853567 ~ 56869607 (-) |
| LOC110528035 | LOC106583131 | coding | upstream | 63770 | 56881331 ~ 57017276 (-) |
| phf13 | LOC106583125 | coding | upstream | 220863 | 57036803 ~ 57046463 (-) |
| LOC110528040 | NA | coding | upstream | 238843 | 57052191 ~ 57059527 (-) |
| cdc42 | cdc42 | coding | upstream | 449881 | 57267442 ~ 57305408 (-) |
| G627295 | NA | non-coding | downstream | 2501 | 56814597 ~ 56814801 (-) |
| G627281 | NA | non-coding | downstream | 66841 | 56748725 ~ 56750461 (-) |
| tfeb | LOC106583139 | non-coding | downstream | 297382 | 56482373 ~ 56593011 (-) |
| G627175 | NA | non-coding | downstream | 320670 | 56495308 ~ 56496632 (-) |
| G627172 | NA | non-coding | downstream | 325346 | 56491664 ~ 56491956 (-) |
| G627305 | LOC106583134 | non-coding | upstream | 5559 | 56823120 ~ 56823415 (-) |
| G627306 | NA | non-coding | upstream | 7164 | 56824725 ~ 56825042 (-) |
| G627307 | NA | non-coding | upstream | 8474 | 56826035 ~ 56826313 (-) |
| G627308 | NA | non-coding | upstream | 9631 | 56827192 ~ 56829036 (-) |
| G627310 | NA | non-coding | upstream | 12502 | 56830063 ~ 56830433 (-) |
| G627254 | NA | other | downstream | 121211 | 56691323 ~ 56696091 (-) |
| LOC110528020 | LOC106582955 | other | downstream | 1383230 | 55420466 ~ 55566988 (-) |
| G625472 | LOC106582968 | other | downstream | 1645102 | 55164492 ~ 55188756 (-) |
| G625426 | NA | other | downstream | 1741906 | 55072479 ~ 55075396 (-) |
| G622985 | NA | other | downstream | 3494471 | 53305536 ~ 53322831 (-) |
| G627314 | NA | other | upstream | 17024 | 56834350 ~ 56835092 (-) |
| G627323 | NA | other | upstream | 29401 | 56846962 ~ 56852301 (-) |
| G628575 | LOC106579815 | other | upstream | 1054489 | 57872050 ~ 57873331 (-) |
