Gene
RNA
| Item | Value |
|---|---|
| gene id | G627314 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 56834350 ~ 56835092 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU713309 | False | 283 | lncRNA | 0.40 | 2 | 56834350 | 56835092 |
| TU713310 | True | 370 | TUCP | 0.48 | 3 | 56834585 | 56835092 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psma5 | psma5 | coding | downstream | 28337 | 56796848 ~ 56806013 (-) |
| sort1a | LOC106583135 | coding | downstream | 37746 | 56772815 ~ 56796604 (-) |
| mdm4 | mdm4 | coding | downstream | 61924 | 56757066 ~ 56772426 (-) |
| myog | tmyogenin | coding | downstream | 114163 | 56716876 ~ 56720187 (-) |
| tmem183a | tmem183a | coding | downstream | 229756 | 56599243 ~ 56604594 (-) |
| vamp3 | vamp3 | coding | upstream | 18719 | 56853567 ~ 56869607 (-) |
| LOC110528035 | LOC106583131 | coding | upstream | 46239 | 56881331 ~ 57017276 (-) |
| phf13 | LOC106583125 | coding | upstream | 203332 | 57036803 ~ 57046463 (-) |
| LOC110528040 | NA | coding | upstream | 221312 | 57052191 ~ 57059527 (-) |
| cdc42 | cdc42 | coding | upstream | 432350 | 57267442 ~ 57305408 (-) |
| G627313 | NA | non-coding | downstream | 58 | 56833973 ~ 56834292 (-) |
| G627311 | NA | non-coding | downstream | 3246 | 56830524 ~ 56831104 (-) |
| G627310 | NA | non-coding | downstream | 3917 | 56830063 ~ 56830433 (-) |
| G627308 | NA | non-coding | downstream | 5314 | 56827192 ~ 56829036 (-) |
| G627307 | NA | non-coding | downstream | 8037 | 56826035 ~ 56826313 (-) |
| G627316 | NA | non-coding | upstream | 5487 | 56840579 ~ 56842129 (-) |
| G627342 | NA | non-coding | upstream | 61159 | 56896251 ~ 56896997 (-) |
| G627343 | NA | non-coding | upstream | 63000 | 56898092 ~ 56898535 (-) |
| G627346 | NA | non-coding | upstream | 69308 | 56904400 ~ 56904778 (-) |
| G627408 | NA | non-coding | upstream | 149252 | 56984344 ~ 56987712 (-) |
| G627254 | NA | other | downstream | 138259 | 56691323 ~ 56696091 (-) |
| LOC110528020 | LOC106582955 | other | downstream | 1400278 | 55420466 ~ 55566988 (-) |
| G625472 | LOC106582968 | other | downstream | 1662150 | 55164492 ~ 55188756 (-) |
| G625426 | NA | other | downstream | 1758954 | 55072479 ~ 55075396 (-) |
| G622985 | NA | other | downstream | 3511519 | 53305536 ~ 53322831 (-) |
| G627323 | NA | other | upstream | 11870 | 56846962 ~ 56852301 (-) |
| G628575 | LOC106579815 | other | upstream | 1036958 | 57872050 ~ 57873331 (-) |
| G628714 | NA | other | upstream | 1282098 | 58117190 ~ 58118122 (-) |
