G626642


Basic Information

Item Value
gene id G626642
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 56834354 ~ 56834678 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU712578
atCGTCAGTTTTATAACTGAACATTTACAGTTATTTGtggaaaaataaaatacaactcCAAACTCTCACGGTACGGTAATTGCTTggtgaaaaaacaaaaacaaaaacaatcaaGACCGTCTAACATATAGCAGAATGctttcgacacacccactcctttcctttcgACACacccactcctttcctttcgACACATCTACTCCTttcctttcgacacacccactcctttcctttcgACAAATCCACTCCTTTCCATTCGACACATCAACTCCTTTCCCt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU712578 True 279 lncRNA 0.40 2 56834354 56834678

Neighbor

gene id symbol gene type direction distance location
LOC110528029 mdm4 coding upstream 75131 56750804 ~ 56766586 (+)
ppfia4 LOC106583137 coding upstream 117541 56605892 ~ 56716813 (+)
mdfi LOC106583052 coding upstream 458292 56375199 ~ 56376062 (+)
foxp4 LOC106583051 coding upstream 538495 56107667 ~ 56295859 (+)
LOC110528971 LOC106583048 coding upstream 1036070 55792291 ~ 55798284 (+)
LOC110528976 LOC106583066 coding downstream 13828 56848506 ~ 56849449 (+)
LOC110528036 LOC106583132 coding downstream 183867 57018545 ~ 57029242 (+)
fbxo2 LOC106583126 coding downstream 211822 57046500 ~ 57052885 (+)
wnt4a1 wnt4a1 coding downstream 376962 57211640 ~ 57240084 (+)
snrpe ruxe coding downstream 484991 57319669 ~ 57323047 (+)
G626640 NA non-coding upstream 3254 56830887 ~ 56831100 (+)
G626639 NA non-coding upstream 3890 56830189 ~ 56830464 (+)
G626638 NA non-coding upstream 5319 56828573 ~ 56829035 (+)
G626633 NA non-coding upstream 18856 56815026 ~ 56815498 (+)
G626645 NA non-coding downstream 970 56835648 ~ 56835859 (+)
LOC110528032 LOC106583134 non-coding downstream 2107 56817281 ~ 56842143 (+)
G626661 NA non-coding downstream 37388 56872066 ~ 56872274 (+)
G626663 NA non-coding downstream 38372 56873050 ~ 56873275 (+)
G626664 NA non-coding downstream 38666 56873344 ~ 56873604 (+)
G626417 NA other upstream 349050 56482394 ~ 56485304 (+)
G626004 NA other upstream 755425 56071054 ~ 56078929 (+)
LOC110528024 LOC106583050 other upstream 1119643 55711635 ~ 55714713 (+)
G625222 NA other upstream 1361511 55472468 ~ 55472843 (+)
G625038 NA other upstream 1620443 55211705 ~ 55213911 (+)
G627035 NA other downstream 708204 57542882 ~ 57596051 (+)
LOC110528055 LOC106583107 other downstream 1083356 57917801 ~ 58055214 (+)
LOC110528980 LOC106583093 other downstream 1668872 58502198 ~ 58589001 (+)
G628468 LOC106583084 other downstream 1873617 58708295 ~ 58713584 (+)

Expression


Co-expression Network