Gene
RNA
| Item | Value |
|---|---|
| gene id | G626670 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 56879408 ~ 56879677 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU712608 | True | 270 | lncRNA | 0.37 | 1 | 56879408 | 56879677 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528976 | LOC106583066 | coding | upstream | 29959 | 56848506 ~ 56849449 (+) |
| LOC110528032 | LOC106583134 | coding | upstream | 37265 | 56817281 ~ 56842143 (+) |
| LOC110528029 | mdm4 | coding | upstream | 120185 | 56750804 ~ 56766586 (+) |
| ppfia4 | LOC106583137 | coding | upstream | 162595 | 56605892 ~ 56716813 (+) |
| mdfi | LOC106583052 | coding | upstream | 503346 | 56375199 ~ 56376062 (+) |
| LOC110528036 | LOC106583132 | coding | downstream | 138868 | 57018545 ~ 57029242 (+) |
| fbxo2 | LOC106583126 | coding | downstream | 166823 | 57046500 ~ 57052885 (+) |
| wnt4a1 | wnt4a1 | coding | downstream | 331963 | 57211640 ~ 57240084 (+) |
| snrpe | ruxe | coding | downstream | 439992 | 57319669 ~ 57323047 (+) |
| LOC100135783 | LOC100135783 | coding | downstream | 456921 | 57336598 ~ 57405253 (+) |
| G626664 | NA | non-coding | upstream | 5804 | 56873344 ~ 56873604 (+) |
| G626663 | NA | non-coding | upstream | 6133 | 56873050 ~ 56873275 (+) |
| G626661 | NA | non-coding | upstream | 7134 | 56872066 ~ 56872274 (+) |
| G626645 | NA | non-coding | upstream | 43549 | 56835648 ~ 56835859 (+) |
| G626671 | NA | non-coding | downstream | 1661 | 56881338 ~ 56886168 (+) |
| G626685 | NA | non-coding | downstream | 16540 | 56896217 ~ 56896490 (+) |
| G626681 | NA | non-coding | downstream | 17893 | 56897570 ~ 56898524 (+) |
| G626736 | NA | non-coding | downstream | 153221 | 57032898 ~ 57034935 (+) |
| G626737 | NA | non-coding | downstream | 155522 | 57035199 ~ 57039648 (+) |
| G626417 | NA | other | upstream | 394104 | 56482394 ~ 56485304 (+) |
| G626004 | NA | other | upstream | 800479 | 56071054 ~ 56078929 (+) |
| LOC110528024 | LOC106583050 | other | upstream | 1164697 | 55711635 ~ 55714713 (+) |
| G625222 | NA | other | upstream | 1406565 | 55472468 ~ 55472843 (+) |
| G625038 | NA | other | upstream | 1665497 | 55211705 ~ 55213911 (+) |
| G627035 | NA | other | downstream | 663205 | 57542882 ~ 57596051 (+) |
| LOC110528055 | LOC106583107 | other | downstream | 1038357 | 57917801 ~ 58055214 (+) |
| LOC110528980 | LOC106583093 | other | downstream | 1623873 | 58502198 ~ 58589001 (+) |
| G628468 | LOC106583084 | other | downstream | 1828618 | 58708295 ~ 58713584 (+) |
