G626685


Basic Information

Item Value
gene id G626685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 56896217 ~ 56896490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU712624
caaataagaaaagagaaactaATATCCATCATTAATATAAGAcattgaaggtcagtcaatccagaaaatgccaaaaaacgttgaaagtttcttcaagtgcagtcacaaaaaccatcaagcgctatgatgaaactggctctcatgaggaccgccacaggaaaggaagagccagagttacctctgctgcagaggataagttcattggagttaccagcctcagaaattacagcccaaataaatgcttcacagagttcaagtaacagacgcatctcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU712624 True 274 lncRNA 0.40 1 56896217 56896490

Neighbor

gene id symbol gene type direction distance location
LOC110528976 LOC106583066 coding upstream 46768 56848506 ~ 56849449 (+)
LOC110528032 LOC106583134 coding upstream 54074 56817281 ~ 56842143 (+)
LOC110528029 mdm4 coding upstream 136994 56750804 ~ 56766586 (+)
ppfia4 LOC106583137 coding upstream 179404 56605892 ~ 56716813 (+)
mdfi LOC106583052 coding upstream 520155 56375199 ~ 56376062 (+)
LOC110528036 LOC106583132 coding downstream 122055 57018545 ~ 57029242 (+)
fbxo2 LOC106583126 coding downstream 150010 57046500 ~ 57052885 (+)
wnt4a1 wnt4a1 coding downstream 315150 57211640 ~ 57240084 (+)
snrpe ruxe coding downstream 423179 57319669 ~ 57323047 (+)
LOC100135783 LOC100135783 coding downstream 440108 57336598 ~ 57405253 (+)
G626671 NA non-coding upstream 10049 56881338 ~ 56886168 (+)
G626670 NA non-coding upstream 16540 56879408 ~ 56879677 (+)
G626664 NA non-coding upstream 22613 56873344 ~ 56873604 (+)
G626663 NA non-coding upstream 22942 56873050 ~ 56873275 (+)
G626661 NA non-coding upstream 23943 56872066 ~ 56872274 (+)
G626681 NA non-coding downstream 1080 56897570 ~ 56898524 (+)
G626736 NA non-coding downstream 136408 57032898 ~ 57034935 (+)
G626737 NA non-coding downstream 138709 57035199 ~ 57039648 (+)
G626770 NA non-coding downstream 146382 57042872 ~ 57043270 (+)
G626683 NA non-coding downstream 218188 57114678 ~ 57115898 (+)
G626417 NA other upstream 410913 56482394 ~ 56485304 (+)
G626004 NA other upstream 817288 56071054 ~ 56078929 (+)
LOC110528024 LOC106583050 other upstream 1181506 55711635 ~ 55714713 (+)
G625222 NA other upstream 1423374 55472468 ~ 55472843 (+)
G625038 NA other upstream 1682306 55211705 ~ 55213911 (+)
G627035 NA other downstream 646392 57542882 ~ 57596051 (+)
LOC110528055 LOC106583107 other downstream 1021544 57917801 ~ 58055214 (+)
LOC110528980 LOC106583093 other downstream 1607060 58502198 ~ 58589001 (+)
G628468 LOC106583084 other downstream 1811805 58708295 ~ 58713584 (+)

Expression


Co-expression Network