Gene
RNA
| Item | Value |
|---|---|
| gene id | G627343 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 56898092 ~ 56898535 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU713340 | True | 444 | lncRNA | 0.37 | 1 | 56898092 | 56898535 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vamp3 | vamp3 | coding | downstream | 28485 | 56853567 ~ 56869607 (-) |
| psma5 | psma5 | coding | downstream | 92079 | 56796848 ~ 56806013 (-) |
| sort1a | LOC106583135 | coding | downstream | 101488 | 56772815 ~ 56796604 (-) |
| mdm4 | mdm4 | coding | downstream | 125666 | 56757066 ~ 56772426 (-) |
| myog | tmyogenin | coding | downstream | 177905 | 56716876 ~ 56720187 (-) |
| phf13 | LOC106583125 | coding | upstream | 139889 | 57036803 ~ 57046463 (-) |
| LOC110528040 | NA | coding | upstream | 157869 | 57052191 ~ 57059527 (-) |
| cdc42 | cdc42 | coding | upstream | 368907 | 57267442 ~ 57305408 (-) |
| LOC110528043 | LOC106583121 | coding | upstream | 507212 | 57405747 ~ 57441999 (-) |
| LOC110528045 | LOC106583117 | coding | upstream | 563385 | 57461920 ~ 57541619 (-) |
| G627342 | NA | non-coding | downstream | 1095 | 56896251 ~ 56896997 (-) |
| G627316 | NA | non-coding | downstream | 55963 | 56840579 ~ 56842129 (-) |
| G627314 | NA | non-coding | downstream | 63000 | 56834350 ~ 56835092 (-) |
| G627313 | NA | non-coding | downstream | 63800 | 56833973 ~ 56834292 (-) |
| G627311 | NA | non-coding | downstream | 66988 | 56830524 ~ 56831104 (-) |
| G627346 | NA | non-coding | upstream | 5865 | 56904400 ~ 56904778 (-) |
| G627408 | NA | non-coding | upstream | 85809 | 56984344 ~ 56987712 (-) |
| G627432 | NA | non-coding | upstream | 123354 | 57021889 ~ 57022773 (-) |
| G627381 | NA | non-coding | upstream | 134315 | 57032850 ~ 57034989 (-) |
| G627323 | NA | other | downstream | 45791 | 56846962 ~ 56852301 (-) |
| G627254 | NA | other | downstream | 202001 | 56691323 ~ 56696091 (-) |
| LOC110528020 | LOC106582955 | other | downstream | 1464020 | 55420466 ~ 55566988 (-) |
| G628575 | LOC106579815 | other | upstream | 973515 | 57872050 ~ 57873331 (-) |
| G628714 | NA | other | upstream | 1218655 | 58117190 ~ 58118122 (-) |
| LOC110528069 | LOC106583062 | other | upstream | 1527640 | 58425680 ~ 58437154 (-) |
| LOC110528083 | LOC106583085 | other | upstream | 1793282 | 58691817 ~ 58695856 (-) |
