G627617


Basic Information

Item Value
gene id G627617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 57353081 ~ 57353669 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU713645
gtcattatgggctattgtgtgtagattgatgaggggaaaaaacgacttaatccattttagtgtacggctgtaatgtaacaaaatgtggaaaaagtcaaggggtatgaatactttccgaatgcactgtaagaaCGAGAAGCATAGAAATAACCCACATAGAAccgatctaccgcttcttaggcTTGTTTTCAATGACAATGAATGATCTAAAACTCACatttatgtgaatttggttgggttgcccaaaaagttacaatTCGCAGTTTTAATTATATAAACCTACAGTTTGAGCACGCTATGCTCTCCTTTTGCGTCCACCCTCTTCTTTCTCTGCGtcctccctcttctttctctgcgtcctccctcttctttctctgCGTCCTCCCGCTTCTTTCTCTGCGTCCTCCCtcttctttctctgcgtcctccctcttctttctctgCGTCCTCCCTCTTCTTTCTGTGCGtcctccctcttctttctctgtGTCCTCTCTTCATATAAATAGGCTGATGACACAAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU713645 True 523 lncRNA 0.43 2 57353081 57353669

Neighbor

gene id symbol gene type direction distance location
cdc42 cdc42 coding downstream 47673 57267442 ~ 57305408 (-)
LOC110528040 NA coding downstream 293554 57052191 ~ 57059527 (-)
phf13 LOC106583125 coding downstream 306618 57036803 ~ 57046463 (-)
LOC110528035 LOC106583131 coding downstream 335805 56881331 ~ 57017276 (-)
vamp3 vamp3 coding downstream 483474 56853567 ~ 56869607 (-)
LOC110528043 LOC106583121 coding upstream 52078 57405747 ~ 57441999 (-)
LOC110528045 LOC106583117 coding upstream 108251 57461920 ~ 57541619 (-)
LOC118965302 NA coding upstream 165559 57519228 ~ 57523173 (-)
klhdc8a LOC106583114 coding upstream 180608 57534277 ~ 57565272 (-)
LOC110528047 NA coding upstream 225376 57579045 ~ 57602101 (-)
G627563 NA non-coding downstream 54800 57289451 ~ 57298281 (-)
G627555 NA non-coding downstream 115091 57237588 ~ 57237990 (-)
G627505 NA non-coding downstream 151450 57144394 ~ 57201631 (-)
G627477 NA non-coding downstream 236034 57116290 ~ 57117047 (-)
G627714 NA non-coding upstream 161139 57514808 ~ 57517147 (-)
G627835 NA non-coding upstream 356818 57710487 ~ 57710845 (-)
LOC110528052 LOC106583108 non-coding upstream 433291 57782135 ~ 57789159 (-)
G627323 NA other downstream 500780 56846962 ~ 56852301 (-)
G627314 NA other downstream 517989 56834350 ~ 56835092 (-)
G627254 NA other downstream 656990 56691323 ~ 56696091 (-)
G628575 LOC106579815 other upstream 518381 57872050 ~ 57873331 (-)
G628714 NA other upstream 763521 58117190 ~ 58118122 (-)
LOC110528069 LOC106583062 other upstream 1072506 58425680 ~ 58437154 (-)
LOC110528083 LOC106583085 other upstream 1338148 58691817 ~ 58695856 (-)
sfrs3 sfrs3 other upstream 1353903 58707572 ~ 58713630 (-)

Expression


Co-expression Network