Gene
RNA
| Item | Value |
|---|---|
| gene id | G628011 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 57861928 ~ 57862168 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU714070 | True | 241 | lncRNA | 0.37 | 1 | 57861928 | 57862168 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528053 | nucks1 | coding | downstream | 56660 | 57794775 ~ 57805268 (-) |
| LOC110528052 | LOC106583108 | coding | downstream | 72769 | 57782135 ~ 57789159 (-) |
| LOC110528051 | LOC106583109 | coding | downstream | 103397 | 57752075 ~ 57758531 (-) |
| LOC110528050 | LOC106583110 | coding | downstream | 132611 | 57712894 ~ 57729317 (-) |
| LOC110528047 | NA | coding | downstream | 259827 | 57579045 ~ 57602101 (-) |
| LOC110528056 | LOC106583106 | coding | upstream | 259388 | 58121556 ~ 58138678 (-) |
| LOC110528058 | LOC106583105 | coding | upstream | 317690 | 58179858 ~ 58192254 (-) |
| LOC110528061 | mfap2 | coding | upstream | 371288 | 58233456 ~ 58239552 (-) |
| LOC110528062 | LOC106583101 | coding | upstream | 380529 | 58242697 ~ 58253037 (-) |
| LOC110528063 | LOC106583099 | coding | upstream | 404567 | 58266735 ~ 58276595 (-) |
| G627835 | NA | non-coding | downstream | 151083 | 57710487 ~ 57710845 (-) |
| LOC110528045 | LOC106583117 | non-coding | downstream | 320309 | 57461920 ~ 57541619 (-) |
| G627714 | NA | non-coding | downstream | 344781 | 57514808 ~ 57517147 (-) |
| G628013 | NA | non-coding | upstream | 1191 | 57863359 ~ 57863604 (-) |
| G628018 | NA | non-coding | upstream | 3754 | 57865922 ~ 57866160 (-) |
| G628592 | NA | non-coding | upstream | 37634 | 57899802 ~ 57954090 (-) |
| G628649 | NA | non-coding | upstream | 135683 | 57997851 ~ 58005983 (-) |
| G628654 | NA | non-coding | upstream | 137820 | 57999988 ~ 58008064 (-) |
| LOC110528040 | NA | other | downstream | 803358 | 57052191 ~ 57059527 (-) |
| vamp3 | vamp3 | other | downstream | 992477 | 56853567 ~ 56869607 (-) |
| G627323 | NA | other | downstream | 1009627 | 56846962 ~ 56852301 (-) |
| G627314 | NA | other | downstream | 1026836 | 56834350 ~ 56835092 (-) |
| G627254 | NA | other | downstream | 1165837 | 56691323 ~ 56696091 (-) |
| G628575 | LOC106579815 | other | upstream | 9882 | 57872050 ~ 57873331 (-) |
| G628714 | NA | other | upstream | 255022 | 58117190 ~ 58118122 (-) |
| LOC110528069 | LOC106583062 | other | upstream | 564007 | 58425680 ~ 58437154 (-) |
| LOC110528083 | LOC106583085 | other | upstream | 829649 | 58691817 ~ 58695856 (-) |
| sfrs3 | sfrs3 | other | upstream | 845404 | 58707572 ~ 58713630 (-) |
