Gene
RNA
| Item | Value |
|---|---|
| gene id | G628697 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58093047 ~ 58093260 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU714847 | True | 214 | lncRNA | 0.45 | 1 | 58093047 | 58093260 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528053 | nucks1 | coding | downstream | 287779 | 57794775 ~ 57805268 (-) |
| LOC110528052 | LOC106583108 | coding | downstream | 303888 | 57782135 ~ 57789159 (-) |
| LOC110528051 | LOC106583109 | coding | downstream | 334516 | 57752075 ~ 57758531 (-) |
| LOC110528050 | LOC106583110 | coding | downstream | 363730 | 57712894 ~ 57729317 (-) |
| LOC110528047 | NA | coding | downstream | 490946 | 57579045 ~ 57602101 (-) |
| LOC110528056 | LOC106583106 | coding | upstream | 28296 | 58121556 ~ 58138678 (-) |
| LOC110528058 | LOC106583105 | coding | upstream | 86598 | 58179858 ~ 58192254 (-) |
| LOC110528061 | mfap2 | coding | upstream | 140196 | 58233456 ~ 58239552 (-) |
| LOC110528062 | LOC106583101 | coding | upstream | 149437 | 58242697 ~ 58253037 (-) |
| LOC110528063 | LOC106583099 | coding | upstream | 173475 | 58266735 ~ 58276595 (-) |
| G628681 | NA | non-coding | downstream | 37833 | 58051984 ~ 58055214 (-) |
| G628596 | NA | non-coding | downstream | 76275 | 58013683 ~ 58016772 (-) |
| G628654 | NA | non-coding | downstream | 84983 | 57999988 ~ 58008064 (-) |
| G628649 | NA | non-coding | downstream | 87064 | 57997851 ~ 58005983 (-) |
| G628592 | NA | non-coding | downstream | 138957 | 57899802 ~ 57954090 (-) |
| G628700 | NA | non-coding | upstream | 2942 | 58096202 ~ 58096437 (-) |
| G628705 | NA | non-coding | upstream | 13480 | 58106740 ~ 58106998 (-) |
| G628708 | NA | non-coding | upstream | 16264 | 58109524 ~ 58109740 (-) |
| G628712 | NA | non-coding | upstream | 19161 | 58112421 ~ 58112676 (-) |
| G628726 | NA | non-coding | upstream | 47246 | 58140506 ~ 58141151 (-) |
| G628575 | LOC106579815 | other | downstream | 219716 | 57872050 ~ 57873331 (-) |
| LOC110528040 | NA | other | downstream | 1034477 | 57052191 ~ 57059527 (-) |
| vamp3 | vamp3 | other | downstream | 1223596 | 56853567 ~ 56869607 (-) |
| G627323 | NA | other | downstream | 1240746 | 56846962 ~ 56852301 (-) |
| G627314 | NA | other | downstream | 1257955 | 56834350 ~ 56835092 (-) |
| G628714 | NA | other | upstream | 23930 | 58117190 ~ 58118122 (-) |
| LOC110528069 | LOC106583062 | other | upstream | 332915 | 58425680 ~ 58437154 (-) |
| LOC110528083 | LOC106583085 | other | upstream | 598557 | 58691817 ~ 58695856 (-) |
| sfrs3 | sfrs3 | other | upstream | 614312 | 58707572 ~ 58713630 (-) |
| G630132 | NA | other | upstream | 1654190 | 59747450 ~ 59752591 (-) |
