G628215


Basic Information

Item Value
gene id G628215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58194145 ~ 58194396 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU714282
tgacagatggtcactctgacagagctccagagttcctctgtggagattagagaaccttccagaaggacaaccatctctgcagcactccaccactctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaaattcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU714282 True 252 lncRNA 0.48 1 58194145 58194396

Neighbor

gene id symbol gene type direction distance location
LOC118965357 NA coding upstream 95605 58075751 ~ 58098540 (+)
LOC110528055 LOC106583107 coding upstream 138931 57917801 ~ 58055214 (+)
cdk18 LOC106583111 coding upstream 491214 57652040 ~ 57702931 (+)
LOC118965384 NA coding upstream 579511 57612793 ~ 57614634 (+)
si:ch211-112f3.4 LOC106583119 coding upstream 732443 57455837 ~ 57461702 (+)
LOC110528059 LOC106583104 coding downstream 1329 58195725 ~ 58200256 (+)
LOC110528060 LOC106583103 coding downstream 12548 58206944 ~ 58233454 (+)
LOC110528978 atad3 coding downstream 60231 58254627 ~ 58265496 (+)
LOC110527127 NA coding downstream 95029 58289425 ~ 58291045 (+)
LOC110528068 LOC106595335 coding downstream 212389 58406785 ~ 58411255 (+)
G628214 NA non-coding upstream 157 58193123 ~ 58193988 (+)
G628186 NA non-coding upstream 41852 58151994 ~ 58152293 (+)
G628185 NA non-coding upstream 42582 58151336 ~ 58151563 (+)
G628183 NA non-coding upstream 44776 58148994 ~ 58149369 (+)
G628162 NA non-coding upstream 76162 58117039 ~ 58117983 (+)
G628216 NA non-coding downstream 7987 58202383 ~ 58202805 (+)
G628217 NA non-coding downstream 10092 58204488 ~ 58204952 (+)
G628218 NA non-coding downstream 10605 58205001 ~ 58205221 (+)
G628224 NA non-coding downstream 46016 58240412 ~ 58242251 (+)
G627035 NA other upstream 598094 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 871124 57319669 ~ 57323047 (+)
G626417 NA other upstream 1708841 56482394 ~ 56485304 (+)
G626004 NA other upstream 2115216 56071054 ~ 56078929 (+)
LOC110528980 LOC106583093 other downstream 309154 58502198 ~ 58589001 (+)
G628468 LOC106583084 other downstream 513899 58708295 ~ 58713584 (+)
LOC110528095 LOC106565671 other downstream 823949 58969726 ~ 59022859 (+)
LOC110528099 LOC106583069 other downstream 874274 59068637 ~ 59084729 (+)
G629678 NA other downstream 1489935 59684331 ~ 59684763 (+)

Expression


Co-expression Network