Gene
RNA
| Item | Value |
|---|---|
| gene id | G628750 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58205643 ~ 58205909 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU714901 | True | 267 | lncRNA | 0.42 | 1 | 58205643 | 58205909 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528058 | LOC106583105 | coding | downstream | 13389 | 58179858 ~ 58192254 (-) |
| LOC110528056 | LOC106583106 | coding | downstream | 66965 | 58121556 ~ 58138678 (-) |
| LOC110528053 | nucks1 | coding | downstream | 400375 | 57794775 ~ 57805268 (-) |
| LOC110528052 | LOC106583108 | coding | downstream | 416484 | 57782135 ~ 57789159 (-) |
| LOC110528051 | LOC106583109 | coding | downstream | 447112 | 57752075 ~ 57758531 (-) |
| LOC110528061 | mfap2 | coding | upstream | 27547 | 58233456 ~ 58239552 (-) |
| LOC110528062 | LOC106583101 | coding | upstream | 36788 | 58242697 ~ 58253037 (-) |
| LOC110528063 | LOC106583099 | coding | upstream | 60826 | 58266735 ~ 58276595 (-) |
| LOC110528064 | ssu72 | coding | upstream | 71943 | 58277852 ~ 58282613 (-) |
| LOC110528066 | LOC106583064 | coding | upstream | 77835 | 58283744 ~ 58286379 (-) |
| G628746 | NA | non-coding | downstream | 4234 | 58201104 ~ 58201409 (-) |
| G628739 | NA | non-coding | downstream | 27421 | 58177709 ~ 58178222 (-) |
| G628726 | NA | non-coding | downstream | 64492 | 58140506 ~ 58141151 (-) |
| G628712 | NA | non-coding | downstream | 92967 | 58112421 ~ 58112676 (-) |
| G628708 | NA | non-coding | downstream | 95903 | 58109524 ~ 58109740 (-) |
| G628765 | NA | non-coding | upstream | 19948 | 58225857 ~ 58268848 (-) |
| G628768 | NA | non-coding | upstream | 38878 | 58244787 ~ 58269773 (-) |
| G628787 | NA | non-coding | upstream | 65455 | 58271364 ~ 58271743 (-) |
| G628790 | NA | non-coding | upstream | 68151 | 58274060 ~ 58274287 (-) |
| G628791 | NA | non-coding | upstream | 68878 | 58274787 ~ 58275029 (-) |
| G628714 | NA | other | downstream | 87521 | 58117190 ~ 58118122 (-) |
| G628575 | LOC106579815 | other | downstream | 332312 | 57872050 ~ 57873331 (-) |
| LOC110528040 | NA | other | downstream | 1147073 | 57052191 ~ 57059527 (-) |
| vamp3 | vamp3 | other | downstream | 1336192 | 56853567 ~ 56869607 (-) |
| G627323 | NA | other | downstream | 1353342 | 56846962 ~ 56852301 (-) |
| LOC110528069 | LOC106583062 | other | upstream | 220266 | 58425680 ~ 58437154 (-) |
| LOC110528083 | LOC106583085 | other | upstream | 485908 | 58691817 ~ 58695856 (-) |
| sfrs3 | sfrs3 | other | upstream | 501663 | 58707572 ~ 58713630 (-) |
| G630132 | NA | other | upstream | 1541541 | 59747450 ~ 59752591 (-) |
| G630227 | NA | other | upstream | 1710070 | 59915979 ~ 59917551 (-) |
