Gene
RNA
| Item | Value |
|---|---|
| gene id | G628765 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58225857 ~ 58268848 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU714922 | True | 220 | lncRNA | 0.35 | 2 | 58225857 | 58268848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528058 | LOC106583105 | coding | downstream | 33603 | 58179858 ~ 58192254 (-) |
| LOC110528056 | LOC106583106 | coding | downstream | 87179 | 58121556 ~ 58138678 (-) |
| LOC110528053 | nucks1 | coding | downstream | 420589 | 57794775 ~ 57805268 (-) |
| LOC110528052 | LOC106583108 | coding | downstream | 436698 | 57782135 ~ 57789159 (-) |
| LOC110528051 | LOC106583109 | coding | downstream | 467326 | 57752075 ~ 57758531 (-) |
| LOC110528064 | ssu72 | coding | upstream | 9004 | 58277852 ~ 58282613 (-) |
| LOC110528066 | LOC106583064 | coding | upstream | 14896 | 58283744 ~ 58286379 (-) |
| LOC110528979 | LOC106583057 | coding | upstream | 22438 | 58291286 ~ 58292996 (-) |
| LOC110527128 | LOC106583056 | coding | upstream | 41482 | 58310330 ~ 58313518 (-) |
| LOC110528067 | LOC106583063 | coding | upstream | 54020 | 58322868 ~ 58345203 (-) |
| G628750 | NA | non-coding | downstream | 19948 | 58205643 ~ 58205909 (-) |
| G628746 | NA | non-coding | downstream | 24448 | 58201104 ~ 58201409 (-) |
| G628739 | NA | non-coding | downstream | 47635 | 58177709 ~ 58178222 (-) |
| G628726 | NA | non-coding | downstream | 84706 | 58140506 ~ 58141151 (-) |
| G628712 | NA | non-coding | downstream | 113181 | 58112421 ~ 58112676 (-) |
| G628787 | NA | non-coding | upstream | 2516 | 58271364 ~ 58271743 (-) |
| G628790 | NA | non-coding | upstream | 5212 | 58274060 ~ 58274287 (-) |
| G628791 | NA | non-coding | upstream | 5939 | 58274787 ~ 58275029 (-) |
| LOC110528069 | LOC106583062 | non-coding | upstream | 160635 | 58425680 ~ 58437154 (-) |
| LOC110528071 | LOC106583097 | non-coding | upstream | 184129 | 58452974 ~ 58456858 (-) |
| G628714 | NA | other | downstream | 107735 | 58117190 ~ 58118122 (-) |
| G628575 | LOC106579815 | other | downstream | 352526 | 57872050 ~ 57873331 (-) |
| LOC110528040 | NA | other | downstream | 1167287 | 57052191 ~ 57059527 (-) |
| vamp3 | vamp3 | other | downstream | 1356406 | 56853567 ~ 56869607 (-) |
| G627323 | NA | other | downstream | 1373556 | 56846962 ~ 56852301 (-) |
| LOC110528083 | LOC106583085 | other | upstream | 422969 | 58691817 ~ 58695856 (-) |
| sfrs3 | sfrs3 | other | upstream | 438724 | 58707572 ~ 58713630 (-) |
| G630132 | NA | other | upstream | 1478602 | 59747450 ~ 59752591 (-) |
| G630227 | NA | other | upstream | 1647131 | 59915979 ~ 59917551 (-) |
