Gene
RNA
| Item | Value |
|---|---|
| gene id | G628240 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58270805 ~ 58271045 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU714310 | True | 241 | lncRNA | 0.34 | 1 | 58270805 | 58271045 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528978 | atad3 | coding | upstream | 5309 | 58254627 ~ 58265496 (+) |
| LOC110528060 | LOC106583103 | coding | upstream | 37351 | 58206944 ~ 58233454 (+) |
| LOC110528059 | LOC106583104 | coding | upstream | 70549 | 58195725 ~ 58200256 (+) |
| LOC118965357 | NA | coding | upstream | 172265 | 58075751 ~ 58098540 (+) |
| LOC110528055 | LOC106583107 | coding | upstream | 215591 | 57917801 ~ 58055214 (+) |
| LOC110527127 | NA | coding | downstream | 18380 | 58289425 ~ 58291045 (+) |
| LOC110528068 | LOC106595335 | coding | downstream | 135740 | 58406785 ~ 58411255 (+) |
| LOC110528073 | LOC106583096 | coding | downstream | 199067 | 58470112 ~ 58500215 (+) |
| LOC110528980 | LOC106583093 | coding | downstream | 231153 | 58502198 ~ 58589001 (+) |
| nuak2 | LOC106583089 | coding | downstream | 369000 | 58640045 ~ 58655578 (+) |
| G628224 | NA | non-coding | upstream | 28554 | 58240412 ~ 58242251 (+) |
| G628218 | NA | non-coding | upstream | 65584 | 58205001 ~ 58205221 (+) |
| G628217 | NA | non-coding | upstream | 65853 | 58204488 ~ 58204952 (+) |
| G628216 | NA | non-coding | upstream | 68000 | 58202383 ~ 58202805 (+) |
| G628255 | NA | non-coding | downstream | 26743 | 58297788 ~ 58364064 (+) |
| G628344 | NA | non-coding | downstream | 172879 | 58443924 ~ 58448516 (+) |
| G628351 | LOC106583097 | non-coding | downstream | 181935 | 58452980 ~ 58456770 (+) |
| G628432 | NA | non-coding | downstream | 295530 | 58566575 ~ 58567078 (+) |
| G627035 | NA | other | upstream | 674754 | 57542882 ~ 57596051 (+) |
| snrpe | ruxe | other | upstream | 947784 | 57319669 ~ 57323047 (+) |
| G626417 | NA | other | upstream | 1785501 | 56482394 ~ 56485304 (+) |
| G626004 | NA | other | upstream | 2191876 | 56071054 ~ 56078929 (+) |
| G628468 | LOC106583084 | other | downstream | 437250 | 58708295 ~ 58713584 (+) |
| LOC110528095 | LOC106565671 | other | downstream | 747300 | 58969726 ~ 59022859 (+) |
| LOC110528099 | LOC106583069 | other | downstream | 797625 | 59068637 ~ 59084729 (+) |
| G629678 | NA | other | downstream | 1413286 | 59684331 ~ 59684763 (+) |
