Gene
RNA
| Item | Value |
|---|---|
| gene id | G628790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58274060 ~ 58274287 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU714950 | True | 228 | lncRNA | 0.45 | 1 | 58274060 | 58274287 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528062 | LOC106583101 | coding | downstream | 21023 | 58242697 ~ 58253037 (-) |
| LOC110528061 | mfap2 | coding | downstream | 34508 | 58233456 ~ 58239552 (-) |
| LOC110528058 | LOC106583105 | coding | downstream | 81806 | 58179858 ~ 58192254 (-) |
| LOC110528056 | LOC106583106 | coding | downstream | 135382 | 58121556 ~ 58138678 (-) |
| LOC110528053 | nucks1 | coding | downstream | 468792 | 57794775 ~ 57805268 (-) |
| LOC110528064 | ssu72 | coding | upstream | 3565 | 58277852 ~ 58282613 (-) |
| LOC110528066 | LOC106583064 | coding | upstream | 9457 | 58283744 ~ 58286379 (-) |
| LOC110528979 | LOC106583057 | coding | upstream | 16999 | 58291286 ~ 58292996 (-) |
| LOC110527128 | LOC106583056 | coding | upstream | 36043 | 58310330 ~ 58313518 (-) |
| LOC110528067 | LOC106583063 | coding | upstream | 48581 | 58322868 ~ 58345203 (-) |
| G628787 | NA | non-coding | downstream | 2317 | 58271364 ~ 58271743 (-) |
| G628768 | NA | non-coding | downstream | 4287 | 58244787 ~ 58269773 (-) |
| G628765 | NA | non-coding | downstream | 5212 | 58225857 ~ 58268848 (-) |
| G628750 | NA | non-coding | downstream | 68151 | 58205643 ~ 58205909 (-) |
| G628746 | NA | non-coding | downstream | 72651 | 58201104 ~ 58201409 (-) |
| G628791 | NA | non-coding | upstream | 500 | 58274787 ~ 58275029 (-) |
| LOC110528069 | LOC106583062 | non-coding | upstream | 155196 | 58425680 ~ 58437154 (-) |
| LOC110528071 | LOC106583097 | non-coding | upstream | 178690 | 58452974 ~ 58456858 (-) |
| G628878 | NA | non-coding | upstream | 195898 | 58470185 ~ 58496244 (-) |
| G628966 | NA | non-coding | upstream | 288116 | 58562403 ~ 58563031 (-) |
| G628714 | NA | other | downstream | 155938 | 58117190 ~ 58118122 (-) |
| G628575 | LOC106579815 | other | downstream | 400729 | 57872050 ~ 57873331 (-) |
| LOC110528040 | NA | other | downstream | 1215490 | 57052191 ~ 57059527 (-) |
| vamp3 | vamp3 | other | downstream | 1404609 | 56853567 ~ 56869607 (-) |
| G627323 | NA | other | downstream | 1421759 | 56846962 ~ 56852301 (-) |
| LOC110528083 | LOC106583085 | other | upstream | 417530 | 58691817 ~ 58695856 (-) |
| sfrs3 | sfrs3 | other | upstream | 433285 | 58707572 ~ 58713630 (-) |
| G630132 | NA | other | upstream | 1473163 | 59747450 ~ 59752591 (-) |
| G630227 | NA | other | upstream | 1641692 | 59915979 ~ 59917551 (-) |
