G628255


Basic Information

Item Value
gene id G628255
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58297788 ~ 58364064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU714333
aactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtagtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaactaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggtttaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgacaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatgtcagtctctcgatgtgcaaaacttatag

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU714333 True 687 lncRNA 0.43 2 58297788 58364064

Neighbor

gene id symbol gene type direction distance location
LOC110527127 NA coding upstream 6743 58289425 ~ 58291045 (+)
LOC110528978 atad3 coding upstream 32292 58254627 ~ 58265496 (+)
LOC110528060 LOC106583103 coding upstream 64334 58206944 ~ 58233454 (+)
LOC110528059 LOC106583104 coding upstream 97532 58195725 ~ 58200256 (+)
LOC118965357 NA coding upstream 199248 58075751 ~ 58098540 (+)
LOC110528068 LOC106595335 coding downstream 42721 58406785 ~ 58411255 (+)
LOC110528073 LOC106583096 coding downstream 106048 58470112 ~ 58500215 (+)
LOC110528980 LOC106583093 coding downstream 138134 58502198 ~ 58589001 (+)
nuak2 LOC106583089 coding downstream 275981 58640045 ~ 58655578 (+)
LOC110528982 NA coding downstream 301478 58665542 ~ 58668251 (+)
G628240 NA non-coding upstream 26743 58270805 ~ 58271045 (+)
G628224 NA non-coding upstream 55537 58240412 ~ 58242251 (+)
G628218 NA non-coding upstream 92567 58205001 ~ 58205221 (+)
G628217 NA non-coding upstream 92836 58204488 ~ 58204952 (+)
G628344 NA non-coding downstream 79860 58443924 ~ 58448516 (+)
G628351 LOC106583097 non-coding downstream 88916 58452980 ~ 58456770 (+)
G628432 NA non-coding downstream 202511 58566575 ~ 58567078 (+)
G628371 NA non-coding downstream 226034 58590098 ~ 58590347 (+)
LOC110528055 LOC106583107 other upstream 305916 57917801 ~ 58055214 (+)
G627035 NA other upstream 701737 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 974767 57319669 ~ 57323047 (+)
G626417 NA other upstream 1812484 56482394 ~ 56485304 (+)
G626004 NA other upstream 2218859 56071054 ~ 56078929 (+)
G628468 LOC106583084 other downstream 344231 58708295 ~ 58713584 (+)
LOC110528095 LOC106565671 other downstream 654281 58969726 ~ 59022859 (+)
LOC110528099 LOC106583069 other downstream 704606 59068637 ~ 59084729 (+)
G629678 NA other downstream 1320267 59684331 ~ 59684763 (+)

Expression


Co-expression Network