XLOC_025467 (fthl31)


Basic Information

Item Value
gene id XLOC_025467
gene name fthl31
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 32118670 ~ 32120354 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050212
ACTCACAGCTTCAGGAAGATCTGGATAGGTTCTTGCTTCAACAGTGATTGAACGGAACTTCGATCTCGCTTGAATTAATTCtagctctatttatttatttattttgtacaagTATCTATATAGTAAAACCTGCCGAGATGGAGACTTCTCAGATTCGCCAGAACTACGTCCGCGACTGCGAGGCTGCGATCAACAAGATGATCAATCTGGAGCTTTACGCTGGATACACCTACACCTCCATGGCTCACTATTTTAAACGGGACGATGTGGCTCTTCCTGGATTTGCCAAGTTCTTCAAGAAGAACAGTGAGGAGGAGCGCGAACATGCTGAGAAATTCATGGAGTTCCAGAACAAGAGAGGTGGACGCATTGTCCTTCAGGACATCAAGAAGCCTGATCGTGATGTGTGGGGAAATGGGCTGATTGCTATGCAGTGTGCTCTTCAGCTGGAGAAGAACGTCAACCAGGCTCTGCTGGACCTGCATAAGCTCGCCACTGAGATGGGAGACCCTCATCTGTGTGATTTCCTGGAGACTCACTACCTGAATGAGCAGGTTGAGGCCATCAAGAAGCTTGGTGACCACATCACTAACCTCTCCAAGATGGATGCTGGAAACAACAGGATGGCGGAGTACCTGTTTGACAAGCACACCCTGGACAGCTAAACTCTGATCATCTGCATCCTCCAAAGCCTCCAGTTGTACTCTATGCATAAATCATGAAACCATGTTGTCCCGCAGTAAAATCTTTGAGGTTAACATTTAGAGGCTTCATGTTTAAGATCCTGCCTTCTTTGATTAGTCAGCTGATGCCTTGCTTGTTGAATGTGCACTGACTTGGTCACCTTGTGAATCTGATGAATAAACATTTCTGGCTGAA
>TCONS_00050213
GCTTCAGGAAGATCTGGATAGGTTCTTGCTTCAACAGTGATTGAACGGAACTTCGATCTCGCTTGAATTAATTCtagctctatttatttatttattttgtacaagTATCTATATAGTAAAACCTGCCGAGATGGAGACTTCTCAGATTCGCCAGAACTACGTCCGCGACTGCGAGGCTGCGATCAACAAGATGATCAATCTGGAGCTTTACGCTGGATACACCTACACCTCCATGGCTCACTATTTTAAACGGGACGATGTGGCTCTTCCTGGATTTGCCAAGTTCTTCAAGAAGAACAGTGAGGAGGAGCGCGAACATGCTGAGAAATTCATGGAGTTCCAGAACAAGAGAGGTGGACGCATTGTCCTTCAGGACATCAAGGTGCTTTTCCTGTCATGTATTATTTAAAGCAATGTAACATCAACAACTCTAGACACTGTTCTGTTGTTTAGGAAGGGTCTTAACTTGCTCACTGATCTTGTATTTGCTCTTCAGAAGCCTGATCGTGATGTGTGGGGAAATGGGCTGATTGCTATGCAGTGTGCTCTTCAGCTGGAGAAGAACGTCAACCAGGCTCTGCTGGACCTGCATAAGCTCGCCACTGAGATGGGAGACCCTCATCTGTGTGATTTCCTGGAGACTCACTACCTGAATGAGCAGGTTGAGGCCATCAAGAAGCTTGGTGACCACATCACTAACCTCTCCAAGATGGATGCTGGAAACA
>TCONS_00050214
ATGGAGACTTCTCAGATTCGCCAGAACTACGTCCGCGACTGCGAGGCTGCGATCAACAAGATGATCAATCTGGAGCTTTACGCTGGATACACCTACACCTCCATGGCAAGTGCTCACTATTTTAAACGGGACGATGTGGCTCTTCCTGGATTTGCCAAGTTCTTCAAGAAGAACAGTGAGGAGGAGCGCGAACATGCTGAGAAATTCATGGAGTTCCAGAACAAGAGAGGTGGACGCATTGTCCTTCAGGACATCAAGAAGCCTGATCGTGATGTGTGGGGAAATGGGCTGATTGCTATGCAGTGTGCTCTTCAGCTGGAGAAGAACGTCAACCAGGCTCTGCTGGACCTGCATAAGCTCGCCACTGAGATGGGAGACCCTCATCTGTGTGATTTCCTGGAGACTCACTACCTGAATGAGCAGGTTGAGGCCATCAAGAAGCTTGGTGACCACATCACTAACCTCTCCAAGATGGATGCTGGAAACAACAGGATGGCGGAGTACCTGTTTGACAAGCACACCCTGGACAGCTAA

Function

symbol description
fthl31 Predicted to enable ferric iron binding activity and ferrous iron binding activity. Predicted to be involved in intracellular sequestering of iron ion. Predicted to act upstream of or within cellular iron ion homeostasis and iron ion transport. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0006879 cellular iron ion homeostasis biological_process
GO:0006880 intracellular sequestering of iron ion biological_process
GO:0006826 iron ion transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0008198 ferrous iron binding molecular_function
GO:0008199 ferric iron binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050522-428 Predicted to enable ferric iron binding activity and ferrous iron binding activity. Predicted to be involved in intracellular sequestering of iron ion. Predicted to act upstream of or within cellular iron ion homeostasis and iron ion transport. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000094210

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050212 False 879 mRNA 0.46 4 32118670 32120354
TCONS_00050213 False 725 lncRNA 0.46 3 32118677 32120093
TCONS_00050214 True 534 mRNA 0.51 4 32118807 32120140

Neighbor

gene id symbol gene type direction distance location
XLOC_025466 fthl30 coding upstream 5022 32112004 ~ 32113648 (+)
XLOC_025465 fthl28 coding upstream 11998 32105175 ~ 32106672 (+)
XLOC_025464 fthl27 coding upstream 17671 32099507 ~ 32100999 (+)
XLOC_025463 aldh16a1 coding upstream 20155 32080403 ~ 32098515 (+)
XLOC_025462 kcnc3a coding upstream 64741 31953145 ~ 32053929 (+)
XLOC_025468 fthl29 coding downstream 5098 32125452 ~ 32127583 (+)
XLOC_025469 fthl31 coding downstream 9278 32129632 ~ 32130455 (+)
XLOC_025470 BX511021.1 coding downstream 14683 32135037 ~ 32136228 (+)
XLOC_025471 fthl27 coding downstream 19312 32139666 ~ 32140446 (+)
XLOC_025472 syt5a coding downstream 22028 32142382 ~ 32151167 (+)
XLOC_025429 BX649540.1 misc upstream 1869634 30248739 ~ 30249036 (+)
XLOC_025458 NA non-coding upstream 199539 31918162 ~ 31919131 (+)
XLOC_025455 BX324157.1 non-coding upstream 330033 31788521 ~ 31788637 (+)
XLOC_025449 NA non-coding upstream 879107 31231809 ~ 31239563 (+)
XLOC_025447 NA non-coding upstream 947796 31169219 ~ 31170874 (+)
XLOC_025446 NA non-coding upstream 1013017 31097933 ~ 31105653 (+)
XLOC_025473 NA non-coding downstream 173419 32293773 ~ 32297003 (+)
XLOC_025475 NA non-coding downstream 225780 32346134 ~ 32347493 (+)
XLOC_025481 CR936975.1 non-coding downstream 354307 32474661 ~ 32477285 (+)
XLOC_025487 FP236454.1 non-coding downstream 450955 32571309 ~ 32571371 (+)
XLOC_025492 NA non-coding downstream 531343 32651697 ~ 32658436 (+)

Expression


Co-expression Network