Gene
RNA
| Item | Value |
|---|---|
| gene id | G628344 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58443924 ~ 58448516 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| neuroblastoma suppressor of tumorigenicity 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU714425 | True | 487 | lncRNA | 0.50 | 2 | 58443924 | 58448516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528068 | LOC106595335 | coding | upstream | 32669 | 58406785 ~ 58411255 (+) |
| LOC110527127 | NA | coding | upstream | 152879 | 58289425 ~ 58291045 (+) |
| LOC110528978 | atad3 | coding | upstream | 178428 | 58254627 ~ 58265496 (+) |
| LOC110528060 | LOC106583103 | coding | upstream | 210470 | 58206944 ~ 58233454 (+) |
| LOC110528059 | LOC106583104 | coding | upstream | 243668 | 58195725 ~ 58200256 (+) |
| LOC110528073 | LOC106583096 | coding | downstream | 21596 | 58470112 ~ 58500215 (+) |
| LOC110528980 | LOC106583093 | coding | downstream | 53682 | 58502198 ~ 58589001 (+) |
| nuak2 | LOC106583089 | coding | downstream | 191529 | 58640045 ~ 58655578 (+) |
| LOC110528982 | NA | coding | downstream | 217026 | 58665542 ~ 58668251 (+) |
| LOC110528081 | LOC106583088 | coding | downstream | 222547 | 58671063 ~ 58677554 (+) |
| G628255 | NA | non-coding | upstream | 79860 | 58297788 ~ 58364064 (+) |
| G628240 | NA | non-coding | upstream | 172879 | 58270805 ~ 58271045 (+) |
| G628224 | NA | non-coding | upstream | 201673 | 58240412 ~ 58242251 (+) |
| G628218 | NA | non-coding | upstream | 238703 | 58205001 ~ 58205221 (+) |
| G628351 | LOC106583097 | non-coding | downstream | 4464 | 58452980 ~ 58456770 (+) |
| G628432 | NA | non-coding | downstream | 118059 | 58566575 ~ 58567078 (+) |
| G628371 | NA | non-coding | downstream | 141582 | 58590098 ~ 58590347 (+) |
| G628451 | NA | non-coding | downstream | 161595 | 58610111 ~ 58610368 (+) |
| LOC110528055 | LOC106583107 | other | upstream | 452052 | 57917801 ~ 58055214 (+) |
| G627035 | NA | other | upstream | 847873 | 57542882 ~ 57596051 (+) |
| snrpe | ruxe | other | upstream | 1120903 | 57319669 ~ 57323047 (+) |
| G626417 | NA | other | upstream | 1958620 | 56482394 ~ 56485304 (+) |
| G626004 | NA | other | upstream | 2364995 | 56071054 ~ 56078929 (+) |
| G628468 | LOC106583084 | other | downstream | 259779 | 58708295 ~ 58713584 (+) |
| LOC110528095 | LOC106565671 | other | downstream | 569829 | 58969726 ~ 59022859 (+) |
| LOC110528099 | LOC106583069 | other | downstream | 620154 | 59068637 ~ 59084729 (+) |
| G629678 | NA | other | downstream | 1235815 | 59684331 ~ 59684763 (+) |
