Gene
RNA
| Item | Value |
|---|---|
| gene id | G628966 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 58562403 ~ 58563031 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU715144 | True | 444 | lncRNA | 0.45 | 3 | 58562403 | 58563031 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528071 | LOC106583097 | coding | downstream | 105545 | 58452974 ~ 58456858 (-) |
| LOC110528070 | LOC106583098 | coding | downstream | 110176 | 58440240 ~ 58452227 (-) |
| LOC110528069 | LOC106583062 | coding | downstream | 125249 | 58425680 ~ 58437154 (-) |
| LOC110528067 | LOC106583063 | coding | downstream | 217200 | 58322868 ~ 58345203 (-) |
| LOC110527128 | LOC106583056 | coding | downstream | 248885 | 58310330 ~ 58313518 (-) |
| LOC110528074 | LOC106583092 | coding | upstream | 28035 | 58591066 ~ 58619101 (-) |
| LOC110528080 | NA | coding | upstream | 64304 | 58627335 ~ 58629263 (-) |
| ccnd3 | LOC106583090 | coding | upstream | 92778 | 58655809 ~ 58662211 (-) |
| LOC110528082 | LOC106583086 | coding | upstream | 118700 | 58681731 ~ 58687794 (-) |
| LOC110528083 | LOC106583085 | coding | upstream | 130197 | 58691817 ~ 58695856 (-) |
| G628878 | NA | non-coding | downstream | 66159 | 58470185 ~ 58496244 (-) |
| G628791 | NA | non-coding | downstream | 287374 | 58274787 ~ 58275029 (-) |
| G628790 | NA | non-coding | downstream | 288116 | 58274060 ~ 58274287 (-) |
| G628969 | NA | non-coding | upstream | 3537 | 58566568 ~ 58567862 (-) |
| G628988 | NA | non-coding | upstream | 24041 | 58587072 ~ 58588990 (-) |
| G628996 | NA | non-coding | upstream | 56534 | 58619565 ~ 58619795 (-) |
| G628997 | NA | non-coding | upstream | 57303 | 58620334 ~ 58620634 (-) |
| G629001 | NA | non-coding | upstream | 77641 | 58640672 ~ 58641472 (-) |
| G628714 | NA | other | downstream | 444281 | 58117190 ~ 58118122 (-) |
| G628575 | LOC106579815 | other | downstream | 689072 | 57872050 ~ 57873331 (-) |
| LOC110528040 | NA | other | downstream | 1503833 | 57052191 ~ 57059527 (-) |
| vamp3 | vamp3 | other | downstream | 1692952 | 56853567 ~ 56869607 (-) |
| sfrs3 | sfrs3 | other | upstream | 144541 | 58707572 ~ 58713630 (-) |
| G630132 | NA | other | upstream | 1184419 | 59747450 ~ 59752591 (-) |
| G630227 | NA | other | upstream | 1352948 | 59915979 ~ 59917551 (-) |
| G630747 | NA | other | upstream | 1520015 | 60083046 ~ 60083857 (-) |
