G628371


Basic Information

Item Value
gene id G628371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 58590098 ~ 58590347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU714455
GCTGCAGGTCCTGCCTAATGAAAGAGGGACACATAAGGGACACATACCTAAACTGTATTTGATGACATCCCTGATATCAAATGTACAGTTGTCTGGATTGGACCAAACATTACGATGTCCTTTCTAACAAAGTTACCTCTTCATCGTCATCCTCTTCATCCACACCCTCTGACTCCGCGCCACTCTGTCCCTTGTCTGACTGCACGCCGGTCCCCCCAACAAagccatcatcctcctcctcctcctcctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU714455 True 250 lncRNA 0.50 1 58590098 58590347

Neighbor

gene id symbol gene type direction distance location
LOC110528980 LOC106583093 coding upstream 1097 58502198 ~ 58589001 (+)
LOC110528073 LOC106583096 coding upstream 89883 58470112 ~ 58500215 (+)
LOC110528068 LOC106595335 coding upstream 178843 58406785 ~ 58411255 (+)
LOC110527127 NA coding upstream 299053 58289425 ~ 58291045 (+)
LOC110528978 atad3 coding upstream 324602 58254627 ~ 58265496 (+)
nuak2 LOC106583089 coding downstream 49698 58640045 ~ 58655578 (+)
LOC110528982 NA coding downstream 75195 58665542 ~ 58668251 (+)
LOC110528081 LOC106583088 coding downstream 80716 58671063 ~ 58677554 (+)
LOC110528084 LOC106583083 coding downstream 137786 58728133 ~ 58737629 (+)
LOC110528086 LOC106583082 coding downstream 147512 58737859 ~ 58800122 (+)
G628432 NA non-coding upstream 23020 58566575 ~ 58567078 (+)
G628351 LOC106583097 non-coding upstream 133328 58452980 ~ 58456770 (+)
G628344 NA non-coding upstream 141582 58443924 ~ 58448516 (+)
G628255 NA non-coding upstream 226034 58297788 ~ 58364064 (+)
G628451 NA non-coding downstream 19764 58610111 ~ 58610368 (+)
G628457 NA non-coding downstream 29620 58619967 ~ 58620226 (+)
G628458 NA non-coding downstream 32261 58622608 ~ 58623335 (+)
G628476 NA non-coding downstream 122550 58712897 ~ 58718648 (+)
G628478 NA non-coding downstream 252933 58843280 ~ 58852652 (+)
LOC110528055 LOC106583107 other upstream 598226 57917801 ~ 58055214 (+)
G627035 NA other upstream 994047 57542882 ~ 57596051 (+)
snrpe ruxe other upstream 1267077 57319669 ~ 57323047 (+)
G626417 NA other upstream 2104794 56482394 ~ 56485304 (+)
G628468 LOC106583084 other downstream 117948 58708295 ~ 58713584 (+)
LOC110528095 LOC106565671 other downstream 427998 58969726 ~ 59022859 (+)
LOC110528099 LOC106583069 other downstream 478323 59068637 ~ 59084729 (+)
G629678 NA other downstream 1093984 59684331 ~ 59684763 (+)
G629679 NA other downstream 1094525 59684872 ~ 59685187 (+)

Expression


Co-expression Network